Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nr1i3O35627 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
Nr1i3O35627 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nr1i3O35627 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Nr1i3O35627 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Nr1i3O35627 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nr1i3O35627 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nr1i3O35627 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nr1i3O35627 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nr1i3O35627 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nr1i3O35627 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nr1i3O35627 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nr1i3O35627 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nr1i3O35627 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nr1i3O35627 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC18.61■□□□□ 0.57
Nr1i3O35627 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nr1i3O35627 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nr1i3O35627 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nr1i3O35627 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Nr1i3O35627 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nr1i3O35627 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Nr1i3O35627 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nr1i3O35627 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Nr1i3O35627 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nr1i3O35627 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nr1i3O35627 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nr1i3O35627 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Nr1i3O35627 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.6■□□□□ 0.57
Nr1i3O35627 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nr1i3O35627 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Nr1i3O35627 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nr1i3O35627 Gm4974-201ENSMUST00000209974 875 ntBASIC18.6■□□□□ 0.57
Nr1i3O35627 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nr1i3O35627 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nr1i3O35627 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.6■□□□□ 0.57
Nr1i3O35627 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nr1i3O35627 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nr1i3O35627 Gm7292-201ENSMUST00000194706 2527 ntBASIC18.6■□□□□ 0.57
Nr1i3O35627 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
Nr1i3O35627 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Nr1i3O35627 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nr1i3O35627 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nr1i3O35627 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nr1i3O35627 Haglr-201ENSMUST00000100000 2085 ntBASIC18.59■□□□□ 0.57
Nr1i3O35627 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nr1i3O35627 Gm42545-201ENSMUST00000202755 922 ntBASIC18.59■□□□□ 0.57
Nr1i3O35627 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nr1i3O35627 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nr1i3O35627 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Nr1i3O35627 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nr1i3O35627 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nr1i3O35627 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nr1i3O35627 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nr1i3O35627 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.59■□□□□ 0.57
Nr1i3O35627 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.59■□□□□ 0.57
Nr1i3O35627 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nr1i3O35627 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nr1i3O35627 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nr1i3O35627 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Nr1i3O35627 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nr1i3O35627 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nr1i3O35627 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nr1i3O35627 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nr1i3O35627 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC18.58■□□□□ 0.56
Nr1i3O35627 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nr1i3O35627 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.58■□□□□ 0.56
Nr1i3O35627 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.58■□□□□ 0.56
Nr1i3O35627 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.58■□□□□ 0.56
Nr1i3O35627 Gm20049-201ENSMUST00000219950 730 ntBASIC18.58■□□□□ 0.56
Nr1i3O35627 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
Nr1i3O35627 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Nr1i3O35627 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nr1i3O35627 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nr1i3O35627 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nr1i3O35627 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.58■□□□□ 0.56
Nr1i3O35627 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Nr1i3O35627 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nr1i3O35627 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Nr1i3O35627 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nr1i3O35627 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nr1i3O35627 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nr1i3O35627 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Nr1i3O35627 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.57■□□□□ 0.56
Nr1i3O35627 Gm13216-201ENSMUST00000117145 591 ntBASIC18.57■□□□□ 0.56
Nr1i3O35627 Gm27275-201ENSMUST00000184318 272 ntBASIC18.57■□□□□ 0.56
Nr1i3O35627 Gm37292-201ENSMUST00000192062 758 ntBASIC18.57■□□□□ 0.56
Nr1i3O35627 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nr1i3O35627 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nr1i3O35627 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nr1i3O35627 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nr1i3O35627 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nr1i3O35627 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nr1i3O35627 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nr1i3O35627 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nr1i3O35627 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Nr1i3O35627 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Nr1i3O35627 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.56■□□□□ 0.56
Nr1i3O35627 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nr1i3O35627 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nr1i3O35627 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms