Protein–RNA interactions for Protein: O35491

Clk2, Dual specificity protein kinase CLK2, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk2O35491 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clk2O35491 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Clk2O35491 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Clk2O35491 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clk2O35491 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clk2O35491 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clk2O35491 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clk2O35491 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.83■□□□□ 0.61
Clk2O35491 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Clk2O35491 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.83■□□□□ 0.61
Clk2O35491 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Clk2O35491 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Clk2O35491 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Clk2O35491 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Clk2O35491 Gm7213-201ENSMUST00000215977 950 ntBASIC18.83■□□□□ 0.6
Clk2O35491 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clk2O35491 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clk2O35491 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clk2O35491 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Clk2O35491 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clk2O35491 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.83■□□□□ 0.6
Clk2O35491 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clk2O35491 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clk2O35491 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clk2O35491 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clk2O35491 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clk2O35491 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clk2O35491 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clk2O35491 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Clk2O35491 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC18.82■□□□□ 0.6
Clk2O35491 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.82■□□□□ 0.6
Clk2O35491 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC18.82■□□□□ 0.6
Clk2O35491 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Clk2O35491 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC18.82■□□□□ 0.6
Clk2O35491 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC18.82■□□□□ 0.6
Clk2O35491 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.82■□□□□ 0.6
Clk2O35491 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Clk2O35491 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Clk2O35491 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clk2O35491 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clk2O35491 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clk2O35491 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Clk2O35491 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Clk2O35491 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.81■□□□□ 0.6
Clk2O35491 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clk2O35491 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Clk2O35491 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clk2O35491 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.81■□□□□ 0.6
Clk2O35491 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clk2O35491 Gm6728-201ENSMUST00000178117 1065 ntBASIC18.81■□□□□ 0.6
Clk2O35491 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Clk2O35491 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.81■□□□□ 0.6
Clk2O35491 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.81■□□□□ 0.6
Clk2O35491 Gm21559-201ENSMUST00000220638 855 ntBASIC18.81■□□□□ 0.6
Clk2O35491 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Clk2O35491 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clk2O35491 Gm8587-201ENSMUST00000076538 843 ntBASIC18.81■□□□□ 0.6
Clk2O35491 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Clk2O35491 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC18.81■□□□□ 0.6
Clk2O35491 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clk2O35491 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Clk2O35491 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.81■□□□□ 0.6
Clk2O35491 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Clk2O35491 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Clk2O35491 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clk2O35491 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clk2O35491 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clk2O35491 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.8■□□□□ 0.6
Clk2O35491 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clk2O35491 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clk2O35491 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Clk2O35491 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Clk2O35491 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Clk2O35491 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
Clk2O35491 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clk2O35491 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clk2O35491 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clk2O35491 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
Clk2O35491 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.8■□□□□ 0.6
Clk2O35491 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Clk2O35491 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Clk2O35491 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Clk2O35491 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
Clk2O35491 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clk2O35491 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Clk2O35491 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Clk2O35491 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clk2O35491 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Clk2O35491 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clk2O35491 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Clk2O35491 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Clk2O35491 AA414768-201ENSMUST00000121924 1257 ntBASIC18.79■□□□□ 0.6
Clk2O35491 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Clk2O35491 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Clk2O35491 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clk2O35491 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clk2O35491 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clk2O35491 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Clk2O35491 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Clk2O35491 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms