Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC13.55□□□□□ -0.24
Tnfsf11O35235 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tnfsf11O35235 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Tnfsf11O35235 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Tnfsf11O35235 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Tnfsf11O35235 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC13.54□□□□□ -0.24
Tnfsf11O35235 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Tnfsf11O35235 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tnfsf11O35235 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tnfsf11O35235 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tnfsf11O35235 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tnfsf11O35235 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tnfsf11O35235 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC13.54□□□□□ -0.24
Tnfsf11O35235 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tnfsf11O35235 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Tnfsf11O35235 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tnfsf11O35235 Gm13146-201ENSMUST00000118508 780 ntBASIC13.54□□□□□ -0.24
Tnfsf11O35235 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC13.54□□□□□ -0.24
Tnfsf11O35235 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC13.54□□□□□ -0.24
Tnfsf11O35235 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tnfsf11O35235 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tnfsf11O35235 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tnfsf11O35235 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tnfsf11O35235 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tnfsf11O35235 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tnfsf11O35235 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Tnfsf11O35235 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tnfsf11O35235 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tnfsf11O35235 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tnfsf11O35235 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Tnfsf11O35235 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfsf11O35235 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfsf11O35235 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfsf11O35235 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Tnfsf11O35235 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Tnfsf11O35235 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfsf11O35235 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfsf11O35235 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfsf11O35235 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfsf11O35235 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Tnfsf11O35235 Gm43060-201ENSMUST00000200621 289 ntBASIC13.53□□□□□ -0.24
Tnfsf11O35235 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfsf11O35235 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC13.53□□□□□ -0.24
Tnfsf11O35235 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Tnfsf11O35235 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfsf11O35235 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfsf11O35235 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfsf11O35235 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfsf11O35235 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfsf11O35235 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfsf11O35235 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfsf11O35235 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC13.53□□□□□ -0.24
Tnfsf11O35235 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfsf11O35235 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Tnfsf11O35235 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Tnfsf11O35235 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Tnfsf11O35235 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Tnfsf11O35235 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Tnfsf11O35235 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Tnfsf11O35235 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Tnfsf11O35235 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Tnfsf11O35235 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC13.52□□□□□ -0.24
Tnfsf11O35235 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Tnfsf11O35235 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Tnfsf11O35235 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfsf11O35235 Gm13534-201ENSMUST00000121169 513 ntBASIC13.52□□□□□ -0.25
Tnfsf11O35235 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC13.52□□□□□ -0.25
Tnfsf11O35235 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfsf11O35235 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Tnfsf11O35235 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfsf11O35235 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfsf11O35235 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfsf11O35235 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfsf11O35235 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfsf11O35235 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfsf11O35235 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfsf11O35235 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Tnfsf11O35235 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfsf11O35235 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfsf11O35235 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfsf11O35235 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfsf11O35235 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfsf11O35235 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Tnfsf11O35235 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC13.52□□□□□ -0.25
Tnfsf11O35235 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfsf11O35235 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfsf11O35235 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfsf11O35235 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Tnfsf11O35235 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC13.51□□□□□ -0.25
Tnfsf11O35235 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfsf11O35235 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfsf11O35235 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Tnfsf11O35235 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfsf11O35235 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfsf11O35235 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfsf11O35235 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfsf11O35235 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC13.51□□□□□ -0.25
Tnfsf11O35235 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfsf11O35235 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Tnfsf11O35235 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms