Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cx3cl1O35188 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
Cx3cl1O35188 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cx3cl1O35188 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cx3cl1O35188 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Cx3cl1O35188 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cx3cl1O35188 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.25■□□□□ 0.19
Cx3cl1O35188 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.25■□□□□ 0.19
Cx3cl1O35188 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.25■□□□□ 0.19
Cx3cl1O35188 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.25■□□□□ 0.19
Cx3cl1O35188 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cx3cl1O35188 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cx3cl1O35188 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cx3cl1O35188 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.25■□□□□ 0.19
Cx3cl1O35188 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cx3cl1O35188 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.25■□□□□ 0.19
Cx3cl1O35188 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cx3cl1O35188 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.25■□□□□ 0.19
Cx3cl1O35188 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cx3cl1O35188 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cx3cl1O35188 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cx3cl1O35188 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cx3cl1O35188 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cx3cl1O35188 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cx3cl1O35188 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cx3cl1O35188 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
Cx3cl1O35188 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cx3cl1O35188 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cx3cl1O35188 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.24■□□□□ 0.19
Cx3cl1O35188 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Cx3cl1O35188 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.24■□□□□ 0.19
Cx3cl1O35188 Timm23-208ENSMUST00000226683 750 ntBASIC16.24■□□□□ 0.19
Cx3cl1O35188 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.24■□□□□ 0.19
Cx3cl1O35188 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Cx3cl1O35188 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cx3cl1O35188 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Cx3cl1O35188 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cx3cl1O35188 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cx3cl1O35188 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.24■□□□□ 0.19
Cx3cl1O35188 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cx3cl1O35188 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cx3cl1O35188 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cx3cl1O35188 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cx3cl1O35188 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cx3cl1O35188 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cx3cl1O35188 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cx3cl1O35188 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cx3cl1O35188 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cx3cl1O35188 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cx3cl1O35188 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cx3cl1O35188 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cx3cl1O35188 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cx3cl1O35188 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Cx3cl1O35188 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.23■□□□□ 0.19
Cx3cl1O35188 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cx3cl1O35188 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cx3cl1O35188 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cx3cl1O35188 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Cx3cl1O35188 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cx3cl1O35188 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Cx3cl1O35188 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Cx3cl1O35188 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cx3cl1O35188 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.22■□□□□ 0.19
Cx3cl1O35188 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cx3cl1O35188 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Cx3cl1O35188 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cx3cl1O35188 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cx3cl1O35188 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cx3cl1O35188 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cx3cl1O35188 Mir8112-201ENSMUST00000184382 131 ntBASIC16.22■□□□□ 0.19
Cx3cl1O35188 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.22■□□□□ 0.19
Cx3cl1O35188 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.22■□□□□ 0.19
Cx3cl1O35188 Odf3b-204ENSMUST00000227834 930 ntBASIC16.22■□□□□ 0.19
Cx3cl1O35188 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cx3cl1O35188 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cx3cl1O35188 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cx3cl1O35188 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Cx3cl1O35188 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Cx3cl1O35188 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Cx3cl1O35188 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cx3cl1O35188 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cx3cl1O35188 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cx3cl1O35188 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cx3cl1O35188 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Cx3cl1O35188 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cx3cl1O35188 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cx3cl1O35188 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cx3cl1O35188 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cx3cl1O35188 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cx3cl1O35188 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cx3cl1O35188 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cx3cl1O35188 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cx3cl1O35188 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cx3cl1O35188 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cx3cl1O35188 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cx3cl1O35188 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.21■□□□□ 0.19
Cx3cl1O35188 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.21■□□□□ 0.19
Cx3cl1O35188 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cx3cl1O35188 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cx3cl1O35188 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms