Protein–RNA interactions for Protein: O08602

Raet1a, Retinoic acid early-inducible protein 1-alpha, mousemouse

Predictions only

Length 253 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1aO08602 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Raet1aO08602 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Raet1aO08602 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Raet1aO08602 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC15.36■□□□□ 0.05
Raet1aO08602 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Raet1aO08602 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Raet1aO08602 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Raet1aO08602 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.35■□□□□ 0.05
Raet1aO08602 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC15.35■□□□□ 0.05
Raet1aO08602 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Raet1aO08602 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC15.35■□□□□ 0.05
Raet1aO08602 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Raet1aO08602 Gm4974-201ENSMUST00000209974 875 ntBASIC15.35■□□□□ 0.05
Raet1aO08602 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Raet1aO08602 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Raet1aO08602 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Raet1aO08602 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Raet1aO08602 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Raet1aO08602 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Raet1aO08602 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Raet1aO08602 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Raet1aO08602 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Raet1aO08602 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Raet1aO08602 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Raet1aO08602 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Raet1aO08602 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Raet1aO08602 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
Raet1aO08602 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Raet1aO08602 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Raet1aO08602 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Raet1aO08602 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Raet1aO08602 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Raet1aO08602 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Raet1aO08602 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC15.34■□□□□ 0.05
Raet1aO08602 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Raet1aO08602 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.34■□□□□ 0.05
Raet1aO08602 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Raet1aO08602 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Raet1aO08602 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Raet1aO08602 Gm10517-202ENSMUST00000192970 758 ntBASIC15.34■□□□□ 0.05
Raet1aO08602 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Raet1aO08602 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Raet1aO08602 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Raet1aO08602 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Raet1aO08602 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Raet1aO08602 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC15.34■□□□□ 0.05
Raet1aO08602 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Raet1aO08602 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Raet1aO08602 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Raet1aO08602 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Raet1aO08602 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Raet1aO08602 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Raet1aO08602 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Raet1aO08602 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Raet1aO08602 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Raet1aO08602 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Raet1aO08602 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Raet1aO08602 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Raet1aO08602 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC15.33■□□□□ 0.04
Raet1aO08602 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC15.33■□□□□ 0.04
Raet1aO08602 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC15.33■□□□□ 0.04
Raet1aO08602 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Raet1aO08602 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Raet1aO08602 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Raet1aO08602 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Raet1aO08602 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Raet1aO08602 AC124581.1-201ENSMUST00000225416 1399 ntBASIC15.33■□□□□ 0.04
Raet1aO08602 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Raet1aO08602 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.33■□□□□ 0.04
Raet1aO08602 Gm5898-201ENSMUST00000121016 2071 ntBASIC15.32■□□□□ 0.04
Raet1aO08602 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Raet1aO08602 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Raet1aO08602 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Raet1aO08602 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Raet1aO08602 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Raet1aO08602 Gm13168-201ENSMUST00000121771 632 ntBASIC15.32■□□□□ 0.04
Raet1aO08602 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Raet1aO08602 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Raet1aO08602 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Raet1aO08602 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Raet1aO08602 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.32■□□□□ 0.04
Raet1aO08602 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Raet1aO08602 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Raet1aO08602 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Raet1aO08602 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Raet1aO08602 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Raet1aO08602 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Raet1aO08602 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Raet1aO08602 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC15.31■□□□□ 0.04
Raet1aO08602 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC15.31■□□□□ 0.04
Raet1aO08602 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Raet1aO08602 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Raet1aO08602 CT010444.2-201ENSMUST00000217877 1629 ntBASIC15.31■□□□□ 0.04
Raet1aO08602 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Raet1aO08602 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Raet1aO08602 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Raet1aO08602 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Raet1aO08602 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Raet1aO08602 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Raet1aO08602 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms