Protein–RNA interactions for Protein: O08547

Sec22b, Vesicle-trafficking protein SEC22b, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec22bO08547 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sec22bO08547 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
Sec22bO08547 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.15■□□□□ 0.34
Sec22bO08547 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Sec22bO08547 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sec22bO08547 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sec22bO08547 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sec22bO08547 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
Sec22bO08547 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Sec22bO08547 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Sec22bO08547 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Sec22bO08547 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Sec22bO08547 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sec22bO08547 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sec22bO08547 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sec22bO08547 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.14■□□□□ 0.33
Sec22bO08547 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.14■□□□□ 0.33
Sec22bO08547 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.33
Sec22bO08547 Gm15375-201ENSMUST00000119510 849 ntBASIC17.14■□□□□ 0.33
Sec22bO08547 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.14■□□□□ 0.33
Sec22bO08547 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Sec22bO08547 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.14■□□□□ 0.33
Sec22bO08547 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.14■□□□□ 0.33
Sec22bO08547 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sec22bO08547 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sec22bO08547 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sec22bO08547 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sec22bO08547 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sec22bO08547 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sec22bO08547 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sec22bO08547 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Sec22bO08547 Gm13401-201ENSMUST00000117074 291 ntBASIC17.13■□□□□ 0.33
Sec22bO08547 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.13■□□□□ 0.33
Sec22bO08547 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.13■□□□□ 0.33
Sec22bO08547 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sec22bO08547 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sec22bO08547 Mir8112-201ENSMUST00000184382 131 ntBASIC17.13■□□□□ 0.33
Sec22bO08547 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.13■□□□□ 0.33
Sec22bO08547 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sec22bO08547 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sec22bO08547 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sec22bO08547 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sec22bO08547 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sec22bO08547 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Sec22bO08547 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sec22bO08547 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sec22bO08547 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.13■□□□□ 0.33
Sec22bO08547 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sec22bO08547 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.13■□□□□ 0.33
Sec22bO08547 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.12■□□□□ 0.33
Sec22bO08547 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sec22bO08547 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sec22bO08547 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.12■□□□□ 0.33
Sec22bO08547 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sec22bO08547 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sec22bO08547 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Sec22bO08547 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.12■□□□□ 0.33
Sec22bO08547 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sec22bO08547 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sec22bO08547 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sec22bO08547 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Sec22bO08547 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sec22bO08547 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.12■□□□□ 0.33
Sec22bO08547 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Sec22bO08547 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Sec22bO08547 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sec22bO08547 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sec22bO08547 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.12■□□□□ 0.33
Sec22bO08547 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Sec22bO08547 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sec22bO08547 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sec22bO08547 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sec22bO08547 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.12■□□□□ 0.33
Sec22bO08547 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sec22bO08547 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.11■□□□□ 0.33
Sec22bO08547 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sec22bO08547 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sec22bO08547 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sec22bO08547 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sec22bO08547 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Sec22bO08547 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Sec22bO08547 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.11■□□□□ 0.33
Sec22bO08547 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Sec22bO08547 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sec22bO08547 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Sec22bO08547 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sec22bO08547 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sec22bO08547 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sec22bO08547 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sec22bO08547 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Sec22bO08547 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sec22bO08547 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Sec22bO08547 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sec22bO08547 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sec22bO08547 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sec22bO08547 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.11■□□□□ 0.33
Sec22bO08547 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
Sec22bO08547 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sec22bO08547 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sec22bO08547 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms