Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp35M0QWN7 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Usp35M0QWN7 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp35M0QWN7 Mir2861-201ENSMUST00000175539 82 ntBASIC18.57■□□□□ 0.56
Usp35M0QWN7 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Usp35M0QWN7 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp35M0QWN7 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Usp35M0QWN7 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Usp35M0QWN7 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Usp35M0QWN7 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp35M0QWN7 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp35M0QWN7 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp35M0QWN7 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp35M0QWN7 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp35M0QWN7 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp35M0QWN7 Gm13559-201ENSMUST00000120476 863 ntBASIC18.56■□□□□ 0.56
Usp35M0QWN7 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC18.56■□□□□ 0.56
Usp35M0QWN7 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp35M0QWN7 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp35M0QWN7 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC18.56■□□□□ 0.56
Usp35M0QWN7 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Usp35M0QWN7 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp35M0QWN7 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp35M0QWN7 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Usp35M0QWN7 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp35M0QWN7 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Usp35M0QWN7 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Usp35M0QWN7 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp35M0QWN7 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.55■□□□□ 0.56
Usp35M0QWN7 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Usp35M0QWN7 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp35M0QWN7 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Usp35M0QWN7 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.55■□□□□ 0.56
Usp35M0QWN7 Gm11539-201ENSMUST00000119837 557 ntBASIC18.55■□□□□ 0.56
Usp35M0QWN7 Gm13436-201ENSMUST00000120418 567 ntBASIC18.55■□□□□ 0.56
Usp35M0QWN7 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.55■□□□□ 0.56
Usp35M0QWN7 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp35M0QWN7 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp35M0QWN7 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp35M0QWN7 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp35M0QWN7 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp35M0QWN7 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp35M0QWN7 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp35M0QWN7 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.54■□□□□ 0.56
Usp35M0QWN7 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Usp35M0QWN7 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
Usp35M0QWN7 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Usp35M0QWN7 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Usp35M0QWN7 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
Usp35M0QWN7 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Usp35M0QWN7 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Usp35M0QWN7 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC18.54■□□□□ 0.56
Usp35M0QWN7 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Usp35M0QWN7 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp35M0QWN7 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC18.53■□□□□ 0.56
Usp35M0QWN7 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Usp35M0QWN7 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp35M0QWN7 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp35M0QWN7 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp35M0QWN7 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp35M0QWN7 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp35M0QWN7 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp35M0QWN7 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp35M0QWN7 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.53■□□□□ 0.56
Usp35M0QWN7 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp35M0QWN7 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Usp35M0QWN7 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Usp35M0QWN7 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Usp35M0QWN7 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Usp35M0QWN7 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Usp35M0QWN7 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.52■□□□□ 0.56
Usp35M0QWN7 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.52■□□□□ 0.56
Usp35M0QWN7 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Usp35M0QWN7 Gm8969-201ENSMUST00000199694 526 ntBASIC18.52■□□□□ 0.56
Usp35M0QWN7 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Usp35M0QWN7 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Usp35M0QWN7 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Usp35M0QWN7 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Usp35M0QWN7 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Usp35M0QWN7 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.55
Usp35M0QWN7 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Usp35M0QWN7 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.52■□□□□ 0.55
Usp35M0QWN7 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Usp35M0QWN7 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Usp35M0QWN7 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Usp35M0QWN7 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Usp35M0QWN7 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Usp35M0QWN7 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Usp35M0QWN7 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.51■□□□□ 0.55
Usp35M0QWN7 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Usp35M0QWN7 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Usp35M0QWN7 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.51■□□□□ 0.55
Usp35M0QWN7 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Usp35M0QWN7 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Usp35M0QWN7 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Usp35M0QWN7 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Usp35M0QWN7 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Usp35M0QWN7 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.51■□□□□ 0.55
Usp35M0QWN7 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Usp35M0QWN7 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms