Protein–RNA interactions for Protein: J3QMK1

Sgo2b, Shugoshin 2B, mousemouse

Predictions only

Length 1,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgo2bJ3QMK1 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sgo2bJ3QMK1 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sgo2bJ3QMK1 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sgo2bJ3QMK1 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sgo2bJ3QMK1 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sgo2bJ3QMK1 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sgo2bJ3QMK1 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sgo2bJ3QMK1 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sgo2bJ3QMK1 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sgo2bJ3QMK1 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sgo2bJ3QMK1 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sgo2bJ3QMK1 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sgo2bJ3QMK1 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Sgo2bJ3QMK1 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.28■□□□□ 0.36
Sgo2bJ3QMK1 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.28■□□□□ 0.36
Sgo2bJ3QMK1 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.28■□□□□ 0.36
Sgo2bJ3QMK1 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Sgo2bJ3QMK1 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.28■□□□□ 0.36
Sgo2bJ3QMK1 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sgo2bJ3QMK1 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sgo2bJ3QMK1 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Sgo2bJ3QMK1 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sgo2bJ3QMK1 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sgo2bJ3QMK1 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sgo2bJ3QMK1 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sgo2bJ3QMK1 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sgo2bJ3QMK1 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Sgo2bJ3QMK1 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sgo2bJ3QMK1 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Sgo2bJ3QMK1 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Sgo2bJ3QMK1 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sgo2bJ3QMK1 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sgo2bJ3QMK1 Gm20760-201ENSMUST00000179197 648 ntBASIC17.27■□□□□ 0.36
Sgo2bJ3QMK1 Gm37292-201ENSMUST00000192062 758 ntBASIC17.27■□□□□ 0.36
Sgo2bJ3QMK1 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.27■□□□□ 0.36
Sgo2bJ3QMK1 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.27■□□□□ 0.36
Sgo2bJ3QMK1 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.27■□□□□ 0.36
Sgo2bJ3QMK1 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sgo2bJ3QMK1 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
Sgo2bJ3QMK1 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sgo2bJ3QMK1 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sgo2bJ3QMK1 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Sgo2bJ3QMK1 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.27■□□□□ 0.35
Sgo2bJ3QMK1 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
Sgo2bJ3QMK1 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Sgo2bJ3QMK1 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sgo2bJ3QMK1 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sgo2bJ3QMK1 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sgo2bJ3QMK1 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sgo2bJ3QMK1 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sgo2bJ3QMK1 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sgo2bJ3QMK1 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sgo2bJ3QMK1 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sgo2bJ3QMK1 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sgo2bJ3QMK1 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Sgo2bJ3QMK1 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.26■□□□□ 0.35
Sgo2bJ3QMK1 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sgo2bJ3QMK1 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sgo2bJ3QMK1 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sgo2bJ3QMK1 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.26■□□□□ 0.35
Sgo2bJ3QMK1 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sgo2bJ3QMK1 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.26■□□□□ 0.35
Sgo2bJ3QMK1 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.26■□□□□ 0.35
Sgo2bJ3QMK1 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Sgo2bJ3QMK1 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sgo2bJ3QMK1 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sgo2bJ3QMK1 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sgo2bJ3QMK1 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sgo2bJ3QMK1 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sgo2bJ3QMK1 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sgo2bJ3QMK1 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Sgo2bJ3QMK1 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sgo2bJ3QMK1 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sgo2bJ3QMK1 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sgo2bJ3QMK1 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sgo2bJ3QMK1 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Sgo2bJ3QMK1 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sgo2bJ3QMK1 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sgo2bJ3QMK1 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sgo2bJ3QMK1 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.25■□□□□ 0.35
Sgo2bJ3QMK1 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sgo2bJ3QMK1 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sgo2bJ3QMK1 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sgo2bJ3QMK1 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Sgo2bJ3QMK1 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sgo2bJ3QMK1 Gm5643-201ENSMUST00000117081 966 ntBASIC17.24■□□□□ 0.35
Sgo2bJ3QMK1 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sgo2bJ3QMK1 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sgo2bJ3QMK1 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sgo2bJ3QMK1 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sgo2bJ3QMK1 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Sgo2bJ3QMK1 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Sgo2bJ3QMK1 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Sgo2bJ3QMK1 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Sgo2bJ3QMK1 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.23■□□□□ 0.35
Sgo2bJ3QMK1 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.23■□□□□ 0.35
Sgo2bJ3QMK1 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sgo2bJ3QMK1 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Sgo2bJ3QMK1 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Sgo2bJ3QMK1 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms