Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm3139J3QK78 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm3139J3QK78 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm3139J3QK78 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm3139J3QK78 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm3139J3QK78 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.29■□□□□ 0.36
Gm3139J3QK78 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm3139J3QK78 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.29■□□□□ 0.36
Gm3139J3QK78 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.29■□□□□ 0.36
Gm3139J3QK78 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm3139J3QK78 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Gm3139J3QK78 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm3139J3QK78 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Gm3139J3QK78 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Gm3139J3QK78 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gm3139J3QK78 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm3139J3QK78 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm3139J3QK78 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Gm3139J3QK78 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.28■□□□□ 0.36
Gm3139J3QK78 Gm18959-201ENSMUST00000208954 655 ntBASIC17.28■□□□□ 0.36
Gm3139J3QK78 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Gm3139J3QK78 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.28■□□□□ 0.36
Gm3139J3QK78 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Gm3139J3QK78 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Gm3139J3QK78 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.28■□□□□ 0.36
Gm3139J3QK78 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm3139J3QK78 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Gm3139J3QK78 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.28■□□□□ 0.36
Gm3139J3QK78 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm3139J3QK78 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gm3139J3QK78 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm3139J3QK78 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm3139J3QK78 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Gm3139J3QK78 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Gm3139J3QK78 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gm3139J3QK78 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gm3139J3QK78 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gm3139J3QK78 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Gm3139J3QK78 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Gm3139J3QK78 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gm3139J3QK78 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.27■□□□□ 0.35
Gm3139J3QK78 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Gm3139J3QK78 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Gm3139J3QK78 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm3139J3QK78 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm3139J3QK78 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm3139J3QK78 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm3139J3QK78 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Gm3139J3QK78 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm3139J3QK78 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.26■□□□□ 0.35
Gm3139J3QK78 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Gm3139J3QK78 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.26■□□□□ 0.35
Gm3139J3QK78 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Gm3139J3QK78 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Gm3139J3QK78 Gm10231-201ENSMUST00000181584 441 ntBASIC17.26■□□□□ 0.35
Gm3139J3QK78 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm3139J3QK78 Gm10175-202ENSMUST00000208752 441 ntBASIC17.26■□□□□ 0.35
Gm3139J3QK78 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm3139J3QK78 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm3139J3QK78 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm3139J3QK78 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Gm3139J3QK78 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm3139J3QK78 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm3139J3QK78 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Gm3139J3QK78 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm3139J3QK78 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm3139J3QK78 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm3139J3QK78 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.25■□□□□ 0.35
Gm3139J3QK78 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Gm3139J3QK78 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm3139J3QK78 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm3139J3QK78 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm3139J3QK78 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm3139J3QK78 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Gm3139J3QK78 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.25■□□□□ 0.35
Gm3139J3QK78 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.25■□□□□ 0.35
Gm3139J3QK78 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm3139J3QK78 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm3139J3QK78 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm3139J3QK78 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm3139J3QK78 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm3139J3QK78 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm3139J3QK78 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm3139J3QK78 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Gm3139J3QK78 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm3139J3QK78 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm3139J3QK78 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Gm3139J3QK78 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Gm3139J3QK78 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Gm3139J3QK78 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Gm3139J3QK78 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Gm3139J3QK78 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Gm3139J3QK78 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.24■□□□□ 0.35
Gm3139J3QK78 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Gm3139J3QK78 Gm45058-201ENSMUST00000205810 766 ntBASIC17.24■□□□□ 0.35
Gm3139J3QK78 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm3139J3QK78 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm3139J3QK78 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm3139J3QK78 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm3139J3QK78 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms