Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC20.78■□□□□ 0.92
NpcdF8VQB8 Gm15794-201ENSMUST00000120182 631 ntBASIC20.78■□□□□ 0.92
NpcdF8VQB8 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NpcdF8VQB8 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC20.78■□□□□ 0.92
NpcdF8VQB8 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NpcdF8VQB8 Gm9449-201ENSMUST00000207265 1011 ntBASIC20.78■□□□□ 0.92
NpcdF8VQB8 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC20.78■□□□□ 0.92
NpcdF8VQB8 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC20.78■□□□□ 0.92
NpcdF8VQB8 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NpcdF8VQB8 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
NpcdF8VQB8 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NpcdF8VQB8 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC20.78■□□□□ 0.92
NpcdF8VQB8 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
NpcdF8VQB8 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NpcdF8VQB8 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.77■□□□□ 0.92
NpcdF8VQB8 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NpcdF8VQB8 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.77■□□□□ 0.92
NpcdF8VQB8 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NpcdF8VQB8 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
NpcdF8VQB8 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NpcdF8VQB8 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.77■□□□□ 0.92
NpcdF8VQB8 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
NpcdF8VQB8 AC122351.1-201ENSMUST00000220467 126 ntBASIC20.77■□□□□ 0.92
NpcdF8VQB8 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
NpcdF8VQB8 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NpcdF8VQB8 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NpcdF8VQB8 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NpcdF8VQB8 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NpcdF8VQB8 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
NpcdF8VQB8 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
NpcdF8VQB8 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
NpcdF8VQB8 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NpcdF8VQB8 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC20.76■□□□□ 0.91
NpcdF8VQB8 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NpcdF8VQB8 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NpcdF8VQB8 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC20.76■□□□□ 0.91
NpcdF8VQB8 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NpcdF8VQB8 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NpcdF8VQB8 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NpcdF8VQB8 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NpcdF8VQB8 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NpcdF8VQB8 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
NpcdF8VQB8 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NpcdF8VQB8 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NpcdF8VQB8 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
NpcdF8VQB8 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
NpcdF8VQB8 Gm10052-201ENSMUST00000168019 960 ntBASIC20.75■□□□□ 0.91
NpcdF8VQB8 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
NpcdF8VQB8 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC20.75■□□□□ 0.91
NpcdF8VQB8 AC153889.1-201ENSMUST00000219257 330 ntBASIC20.75■□□□□ 0.91
NpcdF8VQB8 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC20.75■□□□□ 0.91
NpcdF8VQB8 Gm7729-201ENSMUST00000050143 801 ntBASIC20.75■□□□□ 0.91
NpcdF8VQB8 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
NpcdF8VQB8 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
NpcdF8VQB8 Cxcl14-202ENSMUST00000224801 1467 ntBASIC20.75■□□□□ 0.91
NpcdF8VQB8 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NpcdF8VQB8 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NpcdF8VQB8 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NpcdF8VQB8 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
NpcdF8VQB8 Gm11452-201ENSMUST00000122376 690 ntBASIC20.74■□□□□ 0.91
NpcdF8VQB8 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC20.74■□□□□ 0.91
NpcdF8VQB8 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NpcdF8VQB8 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC20.74■□□□□ 0.91
NpcdF8VQB8 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NpcdF8VQB8 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
NpcdF8VQB8 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
NpcdF8VQB8 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
NpcdF8VQB8 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
NpcdF8VQB8 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
NpcdF8VQB8 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
NpcdF8VQB8 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NpcdF8VQB8 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
NpcdF8VQB8 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NpcdF8VQB8 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NpcdF8VQB8 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
NpcdF8VQB8 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC20.73■□□□□ 0.91
NpcdF8VQB8 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
NpcdF8VQB8 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NpcdF8VQB8 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NpcdF8VQB8 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NpcdF8VQB8 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
NpcdF8VQB8 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NpcdF8VQB8 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
NpcdF8VQB8 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NpcdF8VQB8 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC20.72■□□□□ 0.91
NpcdF8VQB8 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC20.72■□□□□ 0.91
NpcdF8VQB8 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NpcdF8VQB8 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NpcdF8VQB8 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NpcdF8VQB8 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NpcdF8VQB8 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.71■□□□□ 0.91
NpcdF8VQB8 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NpcdF8VQB8 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NpcdF8VQB8 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NpcdF8VQB8 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NpcdF8VQB8 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC20.71■□□□□ 0.91
NpcdF8VQB8 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NpcdF8VQB8 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
NpcdF8VQB8 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NpcdF8VQB8 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms