Protein–RNA interactions for Protein: F6XDR3

Gm10542, Predicted gene 10542, mousemouse

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10542F6XDR3 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm10542F6XDR3 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm10542F6XDR3 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm10542F6XDR3 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Gm10542F6XDR3 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm10542F6XDR3 Gm45774-201ENSMUST00000211992 2665 ntBASIC12.08□□□□□ -0.48
Gm10542F6XDR3 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm10542F6XDR3 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm10542F6XDR3 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm10542F6XDR3 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Gm10542F6XDR3 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm10542F6XDR3 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm10542F6XDR3 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm10542F6XDR3 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Gm10542F6XDR3 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm10542F6XDR3 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm10542F6XDR3 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm10542F6XDR3 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm10542F6XDR3 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm10542F6XDR3 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Gm10542F6XDR3 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Gm10542F6XDR3 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm10542F6XDR3 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm10542F6XDR3 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm10542F6XDR3 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm10542F6XDR3 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm10542F6XDR3 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm10542F6XDR3 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm10542F6XDR3 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Gm10542F6XDR3 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm10542F6XDR3 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm10542F6XDR3 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm10542F6XDR3 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Gm10542F6XDR3 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm10542F6XDR3 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm10542F6XDR3 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm10542F6XDR3 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Gm10542F6XDR3 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm10542F6XDR3 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm10542F6XDR3 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm10542F6XDR3 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm10542F6XDR3 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm10542F6XDR3 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm10542F6XDR3 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm10542F6XDR3 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Gm10542F6XDR3 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm10542F6XDR3 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Gm10542F6XDR3 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Gm10542F6XDR3 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Gm10542F6XDR3 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Gm10542F6XDR3 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Gm10542F6XDR3 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Gm10542F6XDR3 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm10542F6XDR3 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Gm10542F6XDR3 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Gm10542F6XDR3 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm10542F6XDR3 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Gm10542F6XDR3 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Gm10542F6XDR3 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
Gm10542F6XDR3 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm10542F6XDR3 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm10542F6XDR3 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Gm10542F6XDR3 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Gm10542F6XDR3 Gm45412-201ENSMUST00000210217 2275 ntBASIC12.06□□□□□ -0.48
Gm10542F6XDR3 Gm15743-202ENSMUST00000182690 1901 ntBASIC12.05□□□□□ -0.48
Gm10542F6XDR3 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC12.05□□□□□ -0.48
Gm10542F6XDR3 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm10542F6XDR3 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm10542F6XDR3 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm10542F6XDR3 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm10542F6XDR3 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm10542F6XDR3 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Gm10542F6XDR3 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm10542F6XDR3 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm10542F6XDR3 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Gm10542F6XDR3 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Gm10542F6XDR3 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Gm10542F6XDR3 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm10542F6XDR3 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC12.05□□□□□ -0.48
Gm10542F6XDR3 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC12.05□□□□□ -0.48
Gm10542F6XDR3 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm10542F6XDR3 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Gm10542F6XDR3 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Gm10542F6XDR3 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm10542F6XDR3 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Gm10542F6XDR3 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm10542F6XDR3 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm10542F6XDR3 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm10542F6XDR3 Gm10129-202ENSMUST00000193100 1316 ntBASIC12.05□□□□□ -0.48
Gm10542F6XDR3 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm10542F6XDR3 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm10542F6XDR3 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Gm10542F6XDR3 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm10542F6XDR3 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Gm10542F6XDR3 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Gm10542F6XDR3 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Gm10542F6XDR3 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Gm10542F6XDR3 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Gm10542F6XDR3 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Gm10542F6XDR3 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms