Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Gm5643-201ENSMUST00000117081 966 ntBASIC17.8■□□□□ 0.44
Atf6F6VAN0 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Atf6F6VAN0 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Atf6F6VAN0 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Atf6F6VAN0 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.8■□□□□ 0.44
Atf6F6VAN0 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atf6F6VAN0 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atf6F6VAN0 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atf6F6VAN0 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atf6F6VAN0 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atf6F6VAN0 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atf6F6VAN0 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atf6F6VAN0 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Atf6F6VAN0 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.8■□□□□ 0.44
Atf6F6VAN0 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Atf6F6VAN0 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.79■□□□□ 0.44
Atf6F6VAN0 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.79■□□□□ 0.44
Atf6F6VAN0 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atf6F6VAN0 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.79■□□□□ 0.44
Atf6F6VAN0 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atf6F6VAN0 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atf6F6VAN0 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atf6F6VAN0 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atf6F6VAN0 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atf6F6VAN0 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atf6F6VAN0 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Atf6F6VAN0 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atf6F6VAN0 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atf6F6VAN0 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.79■□□□□ 0.44
Atf6F6VAN0 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atf6F6VAN0 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Atf6F6VAN0 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atf6F6VAN0 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Atf6F6VAN0 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atf6F6VAN0 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Atf6F6VAN0 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atf6F6VAN0 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atf6F6VAN0 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.78■□□□□ 0.44
Atf6F6VAN0 Gm43183-201ENSMUST00000200632 547 ntBASIC17.78■□□□□ 0.44
Atf6F6VAN0 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.78■□□□□ 0.44
Atf6F6VAN0 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atf6F6VAN0 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atf6F6VAN0 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Atf6F6VAN0 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atf6F6VAN0 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atf6F6VAN0 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atf6F6VAN0 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Atf6F6VAN0 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Atf6F6VAN0 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Atf6F6VAN0 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.77■□□□□ 0.44
Atf6F6VAN0 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Atf6F6VAN0 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atf6F6VAN0 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Atf6F6VAN0 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.77■□□□□ 0.44
Atf6F6VAN0 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Atf6F6VAN0 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atf6F6VAN0 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Atf6F6VAN0 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atf6F6VAN0 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atf6F6VAN0 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atf6F6VAN0 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Atf6F6VAN0 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.77■□□□□ 0.43
Atf6F6VAN0 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Atf6F6VAN0 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Atf6F6VAN0 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atf6F6VAN0 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.76■□□□□ 0.43
Atf6F6VAN0 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Atf6F6VAN0 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atf6F6VAN0 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atf6F6VAN0 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Atf6F6VAN0 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atf6F6VAN0 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atf6F6VAN0 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Atf6F6VAN0 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atf6F6VAN0 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Atf6F6VAN0 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Atf6F6VAN0 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Atf6F6VAN0 Gm20760-201ENSMUST00000179197 648 ntBASIC17.76■□□□□ 0.43
Atf6F6VAN0 Gm10698-201ENSMUST00000182663 604 ntBASIC17.76■□□□□ 0.43
Atf6F6VAN0 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.76■□□□□ 0.43
Atf6F6VAN0 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Atf6F6VAN0 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Atf6F6VAN0 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
Atf6F6VAN0 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atf6F6VAN0 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Atf6F6VAN0 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atf6F6VAN0 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Atf6F6VAN0 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atf6F6VAN0 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atf6F6VAN0 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.75■□□□□ 0.43
Atf6F6VAN0 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Atf6F6VAN0 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atf6F6VAN0 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Atf6F6VAN0 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.75■□□□□ 0.43
Atf6F6VAN0 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Atf6F6VAN0 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atf6F6VAN0 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atf6F6VAN0 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atf6F6VAN0 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atf6F6VAN0 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms