Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Mir8112-201ENSMUST00000184382 131 ntBASIC17.59■□□□□ 0.41
Ccdc149F6V035 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc149F6V035 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc149F6V035 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.59■□□□□ 0.41
Ccdc149F6V035 Gm21559-201ENSMUST00000220638 855 ntBASIC17.59■□□□□ 0.41
Ccdc149F6V035 Gm8587-201ENSMUST00000076538 843 ntBASIC17.59■□□□□ 0.41
Ccdc149F6V035 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc149F6V035 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Ccdc149F6V035 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.59■□□□□ 0.41
Ccdc149F6V035 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.58■□□□□ 0.41
Ccdc149F6V035 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ccdc149F6V035 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.58■□□□□ 0.41
Ccdc149F6V035 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ccdc149F6V035 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ccdc149F6V035 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Ccdc149F6V035 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Ccdc149F6V035 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc149F6V035 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc149F6V035 Gm33142-201ENSMUST00000193913 867 ntBASIC17.58■□□□□ 0.4
Ccdc149F6V035 Gm7213-201ENSMUST00000215977 950 ntBASIC17.58■□□□□ 0.4
Ccdc149F6V035 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc149F6V035 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc149F6V035 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Ccdc149F6V035 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
Ccdc149F6V035 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc149F6V035 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc149F6V035 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc149F6V035 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc149F6V035 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc149F6V035 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc149F6V035 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc149F6V035 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc149F6V035 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc149F6V035 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ccdc149F6V035 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc149F6V035 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc149F6V035 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc149F6V035 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.57■□□□□ 0.4
Ccdc149F6V035 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.57■□□□□ 0.4
Ccdc149F6V035 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc149F6V035 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc149F6V035 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc149F6V035 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc149F6V035 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Ccdc149F6V035 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Ccdc149F6V035 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc149F6V035 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Ccdc149F6V035 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
Ccdc149F6V035 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc149F6V035 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc149F6V035 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Ccdc149F6V035 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ccdc149F6V035 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.56■□□□□ 0.4
Ccdc149F6V035 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc149F6V035 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc149F6V035 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc149F6V035 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc149F6V035 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ccdc149F6V035 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.56■□□□□ 0.4
Ccdc149F6V035 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc149F6V035 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc149F6V035 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc149F6V035 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ccdc149F6V035 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc149F6V035 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc149F6V035 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc149F6V035 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc149F6V035 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc149F6V035 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc149F6V035 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc149F6V035 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Ccdc149F6V035 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Ccdc149F6V035 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Ccdc149F6V035 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc149F6V035 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc149F6V035 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc149F6V035 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc149F6V035 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc149F6V035 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc149F6V035 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
Ccdc149F6V035 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc149F6V035 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc149F6V035 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc149F6V035 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.54■□□□□ 0.4
Ccdc149F6V035 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc149F6V035 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc149F6V035 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Ccdc149F6V035 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc149F6V035 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Ccdc149F6V035 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.53■□□□□ 0.4
Ccdc149F6V035 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc149F6V035 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc149F6V035 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc149F6V035 Gm14859-201ENSMUST00000117752 357 ntBASIC17.53■□□□□ 0.4
Ccdc149F6V035 Gm9013-201ENSMUST00000132939 882 ntBASIC17.53■□□□□ 0.4
Ccdc149F6V035 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.53■□□□□ 0.4
Ccdc149F6V035 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.53■□□□□ 0.4
Ccdc149F6V035 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc149F6V035 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.53■□□□□ 0.4
Ccdc149F6V035 Gm10819-201ENSMUST00000099988 561 ntBASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms