Protein–RNA interactions for Protein: E9Q555

Rnf213, E3 ubiquitin-protein ligase RNF213, mousemouse

Known RBP Predictions only

Length 5,152 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf213E9Q555 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rnf213E9Q555 Gm15920-201ENSMUST00000118998 402 ntBASIC8.39□□□□□ -1.07
Rnf213E9Q555 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rnf213E9Q555 Gm27000-201ENSMUST00000182943 842 ntBASIC8.39□□□□□ -1.07
Rnf213E9Q555 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC8.39□□□□□ -1.07
Rnf213E9Q555 Gm43767-201ENSMUST00000198933 381 ntBASIC8.39□□□□□ -1.07
Rnf213E9Q555 Gm45683-201ENSMUST00000210825 1247 ntBASIC8.39□□□□□ -1.07
Rnf213E9Q555 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rnf213E9Q555 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rnf213E9Q555 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rnf213E9Q555 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Rnf213E9Q555 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC8.39□□□□□ -1.07
Rnf213E9Q555 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rnf213E9Q555 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Rnf213E9Q555 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rnf213E9Q555 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Rnf213E9Q555 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Rnf213E9Q555 Gm13616-201ENSMUST00000120600 222 ntBASIC8.39□□□□□ -1.07
Rnf213E9Q555 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC8.39□□□□□ -1.07
Rnf213E9Q555 AC121961.1-201ENSMUST00000218594 1779 ntBASIC8.39□□□□□ -1.07
Rnf213E9Q555 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rnf213E9Q555 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Rnf213E9Q555 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC8.39□□□□□ -1.07
Rnf213E9Q555 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Rnf213E9Q555 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC8.39□□□□□ -1.07
Rnf213E9Q555 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC8.38□□□□□ -1.07
Rnf213E9Q555 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Rnf213E9Q555 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC8.38□□□□□ -1.07
Rnf213E9Q555 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC8.38□□□□□ -1.07
Rnf213E9Q555 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rnf213E9Q555 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rnf213E9Q555 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rnf213E9Q555 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rnf213E9Q555 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC8.38□□□□□ -1.07
Rnf213E9Q555 AC122901.1-201ENSMUST00000214203 1790 ntBASIC8.38□□□□□ -1.07
Rnf213E9Q555 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Rnf213E9Q555 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Rnf213E9Q555 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Rnf213E9Q555 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rnf213E9Q555 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rnf213E9Q555 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rnf213E9Q555 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rnf213E9Q555 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC8.38□□□□□ -1.07
Rnf213E9Q555 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC8.38□□□□□ -1.07
Rnf213E9Q555 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rnf213E9Q555 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Rnf213E9Q555 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rnf213E9Q555 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rnf213E9Q555 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rnf213E9Q555 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC8.38□□□□□ -1.07
Rnf213E9Q555 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
Rnf213E9Q555 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rnf213E9Q555 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Rnf213E9Q555 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Rnf213E9Q555 Gm43935-201ENSMUST00000203569 1050 ntBASIC8.38□□□□□ -1.07
Rnf213E9Q555 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rnf213E9Q555 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rnf213E9Q555 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Rnf213E9Q555 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rnf213E9Q555 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC8.37□□□□□ -1.07
Rnf213E9Q555 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rnf213E9Q555 AC155729.1-201ENSMUST00000227758 544 ntBASIC8.37□□□□□ -1.07
Rnf213E9Q555 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Rnf213E9Q555 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rnf213E9Q555 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Rnf213E9Q555 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rnf213E9Q555 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Rnf213E9Q555 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC8.37□□□□□ -1.07
Rnf213E9Q555 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rnf213E9Q555 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rnf213E9Q555 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rnf213E9Q555 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rnf213E9Q555 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rnf213E9Q555 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rnf213E9Q555 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rnf213E9Q555 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rnf213E9Q555 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rnf213E9Q555 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rnf213E9Q555 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rnf213E9Q555 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rnf213E9Q555 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rnf213E9Q555 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rnf213E9Q555 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rnf213E9Q555 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rnf213E9Q555 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rnf213E9Q555 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rnf213E9Q555 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rnf213E9Q555 Gm15653-201ENSMUST00000119247 907 ntBASIC8.37□□□□□ -1.07
Rnf213E9Q555 Gm4535-201ENSMUST00000182274 558 ntBASIC8.37□□□□□ -1.07
Rnf213E9Q555 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Rnf213E9Q555 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Rnf213E9Q555 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rnf213E9Q555 Gm10355-201ENSMUST00000097146 517 ntBASIC8.37□□□□□ -1.07
Rnf213E9Q555 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Rnf213E9Q555 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rnf213E9Q555 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rnf213E9Q555 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rnf213E9Q555 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Rnf213E9Q555 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Rnf213E9Q555 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms