Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Hfm1D3Z4R1 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Hfm1D3Z4R1 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC24.32■■□□□ 1.48
Hfm1D3Z4R1 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC24.32■■□□□ 1.48
Hfm1D3Z4R1 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Hfm1D3Z4R1 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Hfm1D3Z4R1 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Hfm1D3Z4R1 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
Hfm1D3Z4R1 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
Hfm1D3Z4R1 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Hfm1D3Z4R1 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC24.32■■□□□ 1.48
Hfm1D3Z4R1 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Hfm1D3Z4R1 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC24.31■■□□□ 1.48
Hfm1D3Z4R1 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC24.31■■□□□ 1.48
Hfm1D3Z4R1 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Hfm1D3Z4R1 Vti1a-206ENSMUST00000225529 1244 ntBASIC24.31■■□□□ 1.48
Hfm1D3Z4R1 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Hfm1D3Z4R1 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Hfm1D3Z4R1 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC24.3■■□□□ 1.48
Hfm1D3Z4R1 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Hfm1D3Z4R1 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
Hfm1D3Z4R1 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC24.3■■□□□ 1.48
Hfm1D3Z4R1 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Hfm1D3Z4R1 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Hfm1D3Z4R1 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Hfm1D3Z4R1 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Hfm1D3Z4R1 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Hfm1D3Z4R1 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Hfm1D3Z4R1 AC153794.1-201ENSMUST00000169148 126 ntBASIC24.29■■□□□ 1.48
Hfm1D3Z4R1 Gm44357-201ENSMUST00000195897 142 ntBASIC24.29■■□□□ 1.48
Hfm1D3Z4R1 Gm19658-201ENSMUST00000196231 138 ntBASIC24.29■■□□□ 1.48
Hfm1D3Z4R1 Gm44367-201ENSMUST00000196836 138 ntBASIC24.29■■□□□ 1.48
Hfm1D3Z4R1 Gm44350-201ENSMUST00000197197 138 ntBASIC24.29■■□□□ 1.48
Hfm1D3Z4R1 Gm44390-201ENSMUST00000197533 144 ntBASIC24.29■■□□□ 1.48
Hfm1D3Z4R1 Gm44313-201ENSMUST00000198018 138 ntBASIC24.29■■□□□ 1.48
Hfm1D3Z4R1 Gm44486-201ENSMUST00000198508 138 ntBASIC24.29■■□□□ 1.48
Hfm1D3Z4R1 Gm44454-201ENSMUST00000198541 138 ntBASIC24.29■■□□□ 1.48
Hfm1D3Z4R1 Gm44314-201ENSMUST00000199263 138 ntBASIC24.29■■□□□ 1.48
Hfm1D3Z4R1 Gm44394-201ENSMUST00000199558 138 ntBASIC24.29■■□□□ 1.48
Hfm1D3Z4R1 Gm44484-201ENSMUST00000199873 138 ntBASIC24.29■■□□□ 1.48
Hfm1D3Z4R1 Gm44466-201ENSMUST00000200264 138 ntBASIC24.29■■□□□ 1.48
Hfm1D3Z4R1 Gm44359-201ENSMUST00000200671 138 ntBASIC24.29■■□□□ 1.48
Hfm1D3Z4R1 AC108846.1-201ENSMUST00000214531 513 ntBASIC24.29■■□□□ 1.48
Hfm1D3Z4R1 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Hfm1D3Z4R1 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Hfm1D3Z4R1 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Hfm1D3Z4R1 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
Hfm1D3Z4R1 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
Hfm1D3Z4R1 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Hfm1D3Z4R1 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC24.29■■□□□ 1.48
Hfm1D3Z4R1 Gm45141-201ENSMUST00000206502 1888 ntBASIC24.29■■□□□ 1.48
Hfm1D3Z4R1 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Hfm1D3Z4R1 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Hfm1D3Z4R1 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC24.29■■□□□ 1.48
Hfm1D3Z4R1 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Hfm1D3Z4R1 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC24.29■■□□□ 1.48
Hfm1D3Z4R1 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Hfm1D3Z4R1 AC138767.1-201ENSMUST00000222661 415 ntBASIC24.28■■□□□ 1.48
Hfm1D3Z4R1 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC24.28■■□□□ 1.48
Hfm1D3Z4R1 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Hfm1D3Z4R1 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Hfm1D3Z4R1 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Hfm1D3Z4R1 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Hfm1D3Z4R1 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Hfm1D3Z4R1 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
Hfm1D3Z4R1 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Hfm1D3Z4R1 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
Hfm1D3Z4R1 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Hfm1D3Z4R1 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC24.27■■□□□ 1.48
Hfm1D3Z4R1 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Hfm1D3Z4R1 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC24.27■■□□□ 1.48
Hfm1D3Z4R1 Gm44450-201ENSMUST00000199528 114 ntBASIC24.27■■□□□ 1.48
Hfm1D3Z4R1 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Hfm1D3Z4R1 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Hfm1D3Z4R1 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
Hfm1D3Z4R1 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Hfm1D3Z4R1 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Hfm1D3Z4R1 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Hfm1D3Z4R1 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC24.27■■□□□ 1.48
Hfm1D3Z4R1 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
Hfm1D3Z4R1 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Hfm1D3Z4R1 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
Hfm1D3Z4R1 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Hfm1D3Z4R1 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Hfm1D3Z4R1 Gm13312-201ENSMUST00000119631 718 ntBASIC24.27■■□□□ 1.48
Hfm1D3Z4R1 Gm1818-201ENSMUST00000169406 1184 ntBASIC24.27■■□□□ 1.48
Hfm1D3Z4R1 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Hfm1D3Z4R1 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Hfm1D3Z4R1 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Hfm1D3Z4R1 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Hfm1D3Z4R1 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Hfm1D3Z4R1 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Hfm1D3Z4R1 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Hfm1D3Z4R1 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Hfm1D3Z4R1 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Hfm1D3Z4R1 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Hfm1D3Z4R1 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Hfm1D3Z4R1 Gm1401-201ENSMUST00000122048 772 ntBASIC24.26■■□□□ 1.47
Hfm1D3Z4R1 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
Hfm1D3Z4R1 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 90.1 ms