Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Clrn2B2RVW2 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clrn2B2RVW2 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Clrn2B2RVW2 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clrn2B2RVW2 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Clrn2B2RVW2 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clrn2B2RVW2 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clrn2B2RVW2 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Clrn2B2RVW2 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clrn2B2RVW2 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.07■□□□□ 0.8
Clrn2B2RVW2 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC20.07■□□□□ 0.8
Clrn2B2RVW2 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Clrn2B2RVW2 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Clrn2B2RVW2 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Clrn2B2RVW2 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Clrn2B2RVW2 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Clrn2B2RVW2 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clrn2B2RVW2 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clrn2B2RVW2 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Clrn2B2RVW2 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC20.06■□□□□ 0.8
Clrn2B2RVW2 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clrn2B2RVW2 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clrn2B2RVW2 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clrn2B2RVW2 AC154855.1-201ENSMUST00000227353 1458 ntBASIC20.05■□□□□ 0.8
Clrn2B2RVW2 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clrn2B2RVW2 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC20.05■□□□□ 0.8
Clrn2B2RVW2 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clrn2B2RVW2 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clrn2B2RVW2 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clrn2B2RVW2 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC20.05■□□□□ 0.8
Clrn2B2RVW2 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clrn2B2RVW2 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Clrn2B2RVW2 Mir8112-201ENSMUST00000184382 131 ntBASIC20.05■□□□□ 0.8
Clrn2B2RVW2 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Clrn2B2RVW2 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC20.05■□□□□ 0.8
Clrn2B2RVW2 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC20.05■□□□□ 0.8
Clrn2B2RVW2 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clrn2B2RVW2 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clrn2B2RVW2 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Clrn2B2RVW2 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clrn2B2RVW2 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Clrn2B2RVW2 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Clrn2B2RVW2 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
Clrn2B2RVW2 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clrn2B2RVW2 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clrn2B2RVW2 Gm19721-201ENSMUST00000195284 1764 ntBASIC20.04■□□□□ 0.8
Clrn2B2RVW2 Gm24589-201ENSMUST00000116692 94 ntBASIC20.04■□□□□ 0.8
Clrn2B2RVW2 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clrn2B2RVW2 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Clrn2B2RVW2 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Clrn2B2RVW2 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clrn2B2RVW2 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clrn2B2RVW2 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clrn2B2RVW2 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clrn2B2RVW2 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Clrn2B2RVW2 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Clrn2B2RVW2 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clrn2B2RVW2 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clrn2B2RVW2 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Clrn2B2RVW2 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clrn2B2RVW2 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clrn2B2RVW2 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Clrn2B2RVW2 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clrn2B2RVW2 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
Clrn2B2RVW2 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
Clrn2B2RVW2 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Clrn2B2RVW2 Dmtn-210ENSMUST00000228824 2377 ntBASIC20.02■□□□□ 0.8
Clrn2B2RVW2 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.02■□□□□ 0.8
Clrn2B2RVW2 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Clrn2B2RVW2 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Clrn2B2RVW2 Olfr129-201ENSMUST00000122318 993 ntBASIC20.02■□□□□ 0.8
Clrn2B2RVW2 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC20.02■□□□□ 0.8
Clrn2B2RVW2 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC20.02■□□□□ 0.8
Clrn2B2RVW2 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
Clrn2B2RVW2 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Clrn2B2RVW2 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Clrn2B2RVW2 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Clrn2B2RVW2 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Clrn2B2RVW2 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Clrn2B2RVW2 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC20.02■□□□□ 0.79
Clrn2B2RVW2 Gm43272-201ENSMUST00000200599 1584 ntBASIC20.01■□□□□ 0.79
Clrn2B2RVW2 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Clrn2B2RVW2 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Clrn2B2RVW2 Spr-ps1-201ENSMUST00000089584 605 ntBASIC20.01■□□□□ 0.79
Clrn2B2RVW2 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clrn2B2RVW2 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clrn2B2RVW2 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Clrn2B2RVW2 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Clrn2B2RVW2 Gm45141-201ENSMUST00000206502 1888 ntBASIC20.01■□□□□ 0.79
Clrn2B2RVW2 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clrn2B2RVW2 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Clrn2B2RVW2 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Clrn2B2RVW2 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC20■□□□□ 0.79
Clrn2B2RVW2 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC20■□□□□ 0.79
Clrn2B2RVW2 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Clrn2B2RVW2 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
Clrn2B2RVW2 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC20■□□□□ 0.79
Clrn2B2RVW2 Gm45328-201ENSMUST00000210942 917 ntBASIC20■□□□□ 0.79
Clrn2B2RVW2 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Clrn2B2RVW2 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms