Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC14.42□□□□□ -0.1
Usf3B2RUQ2 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usf3B2RUQ2 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usf3B2RUQ2 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC14.42□□□□□ -0.1
Usf3B2RUQ2 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usf3B2RUQ2 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usf3B2RUQ2 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usf3B2RUQ2 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usf3B2RUQ2 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usf3B2RUQ2 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usf3B2RUQ2 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usf3B2RUQ2 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Usf3B2RUQ2 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.42□□□□□ -0.1
Usf3B2RUQ2 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usf3B2RUQ2 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usf3B2RUQ2 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Usf3B2RUQ2 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Usf3B2RUQ2 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usf3B2RUQ2 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Usf3B2RUQ2 Ank2-226ENSMUST00000189368 339 ntBASIC14.42□□□□□ -0.1
Usf3B2RUQ2 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usf3B2RUQ2 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usf3B2RUQ2 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usf3B2RUQ2 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Usf3B2RUQ2 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usf3B2RUQ2 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usf3B2RUQ2 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usf3B2RUQ2 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usf3B2RUQ2 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usf3B2RUQ2 AC159205.3-201ENSMUST00000224614 874 ntBASIC14.41□□□□□ -0.1
Usf3B2RUQ2 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Usf3B2RUQ2 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usf3B2RUQ2 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usf3B2RUQ2 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usf3B2RUQ2 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.41□□□□□ -0.1
Usf3B2RUQ2 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC14.41□□□□□ -0.1
Usf3B2RUQ2 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Usf3B2RUQ2 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usf3B2RUQ2 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usf3B2RUQ2 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usf3B2RUQ2 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usf3B2RUQ2 Gm7712-202ENSMUST00000222331 1510 ntBASIC14.41□□□□□ -0.1
Usf3B2RUQ2 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC14.41□□□□□ -0.1
Usf3B2RUQ2 Gm11539-201ENSMUST00000119837 557 ntBASIC14.41□□□□□ -0.1
Usf3B2RUQ2 Gm13436-201ENSMUST00000120418 567 ntBASIC14.41□□□□□ -0.1
Usf3B2RUQ2 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Usf3B2RUQ2 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Usf3B2RUQ2 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.41□□□□□ -0.1
Usf3B2RUQ2 Gm7889-201ENSMUST00000185591 958 ntBASIC14.41□□□□□ -0.1
Usf3B2RUQ2 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Usf3B2RUQ2 Gm30025-201ENSMUST00000218555 728 ntBASIC14.41□□□□□ -0.1
Usf3B2RUQ2 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Usf3B2RUQ2 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usf3B2RUQ2 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usf3B2RUQ2 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usf3B2RUQ2 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Usf3B2RUQ2 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Usf3B2RUQ2 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usf3B2RUQ2 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usf3B2RUQ2 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usf3B2RUQ2 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usf3B2RUQ2 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usf3B2RUQ2 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC14.4□□□□□ -0.1
Usf3B2RUQ2 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Usf3B2RUQ2 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usf3B2RUQ2 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usf3B2RUQ2 Gm23634-201ENSMUST00000175071 91 ntBASIC14.4□□□□□ -0.1
Usf3B2RUQ2 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC14.4□□□□□ -0.1
Usf3B2RUQ2 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usf3B2RUQ2 Otx2os1-204ENSMUST00000227221 751 ntBASIC14.4□□□□□ -0.1
Usf3B2RUQ2 Odf3b-204ENSMUST00000227834 930 ntBASIC14.4□□□□□ -0.1
Usf3B2RUQ2 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC14.4□□□□□ -0.1
Usf3B2RUQ2 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.4□□□□□ -0.1
Usf3B2RUQ2 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usf3B2RUQ2 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usf3B2RUQ2 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usf3B2RUQ2 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usf3B2RUQ2 Gm12382-201ENSMUST00000122005 922 ntBASIC14.39□□□□□ -0.11
Usf3B2RUQ2 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usf3B2RUQ2 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usf3B2RUQ2 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usf3B2RUQ2 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC14.39□□□□□ -0.11
Usf3B2RUQ2 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Usf3B2RUQ2 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Usf3B2RUQ2 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usf3B2RUQ2 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Usf3B2RUQ2 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usf3B2RUQ2 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usf3B2RUQ2 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usf3B2RUQ2 Gm37292-201ENSMUST00000192062 758 ntBASIC14.39□□□□□ -0.11
Usf3B2RUQ2 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usf3B2RUQ2 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usf3B2RUQ2 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usf3B2RUQ2 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usf3B2RUQ2 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usf3B2RUQ2 Gm13559-201ENSMUST00000120476 863 ntBASIC14.38□□□□□ -0.11
Usf3B2RUQ2 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usf3B2RUQ2 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usf3B2RUQ2 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Usf3B2RUQ2 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms