Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Col4a6B1AVK5 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Col4a6B1AVK5 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC17.85■□□□□ 0.45
Col4a6B1AVK5 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC17.85■□□□□ 0.45
Col4a6B1AVK5 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC17.85■□□□□ 0.45
Col4a6B1AVK5 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col4a6B1AVK5 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col4a6B1AVK5 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Col4a6B1AVK5 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Col4a6B1AVK5 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC17.85■□□□□ 0.45
Col4a6B1AVK5 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col4a6B1AVK5 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col4a6B1AVK5 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col4a6B1AVK5 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col4a6B1AVK5 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col4a6B1AVK5 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Col4a6B1AVK5 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col4a6B1AVK5 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Col4a6B1AVK5 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC17.84■□□□□ 0.45
Col4a6B1AVK5 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col4a6B1AVK5 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col4a6B1AVK5 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col4a6B1AVK5 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col4a6B1AVK5 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col4a6B1AVK5 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col4a6B1AVK5 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Col4a6B1AVK5 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Col4a6B1AVK5 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.84■□□□□ 0.45
Col4a6B1AVK5 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Col4a6B1AVK5 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.83■□□□□ 0.45
Col4a6B1AVK5 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC17.83■□□□□ 0.45
Col4a6B1AVK5 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Col4a6B1AVK5 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Col4a6B1AVK5 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.83■□□□□ 0.45
Col4a6B1AVK5 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Col4a6B1AVK5 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.83■□□□□ 0.45
Col4a6B1AVK5 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col4a6B1AVK5 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Col4a6B1AVK5 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Col4a6B1AVK5 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col4a6B1AVK5 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Col4a6B1AVK5 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col4a6B1AVK5 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col4a6B1AVK5 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
Col4a6B1AVK5 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Col4a6B1AVK5 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.83■□□□□ 0.44
Col4a6B1AVK5 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.83■□□□□ 0.44
Col4a6B1AVK5 Gm5712-201ENSMUST00000199748 1043 ntBASIC17.83■□□□□ 0.44
Col4a6B1AVK5 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col4a6B1AVK5 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Col4a6B1AVK5 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Col4a6B1AVK5 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.82■□□□□ 0.44
Col4a6B1AVK5 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col4a6B1AVK5 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col4a6B1AVK5 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col4a6B1AVK5 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Col4a6B1AVK5 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col4a6B1AVK5 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Col4a6B1AVK5 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Col4a6B1AVK5 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col4a6B1AVK5 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col4a6B1AVK5 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
Col4a6B1AVK5 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC17.82■□□□□ 0.44
Col4a6B1AVK5 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col4a6B1AVK5 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.82■□□□□ 0.44
Col4a6B1AVK5 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Col4a6B1AVK5 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col4a6B1AVK5 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.81■□□□□ 0.44
Col4a6B1AVK5 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Col4a6B1AVK5 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col4a6B1AVK5 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Col4a6B1AVK5 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col4a6B1AVK5 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.81■□□□□ 0.44
Col4a6B1AVK5 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.81■□□□□ 0.44
Col4a6B1AVK5 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col4a6B1AVK5 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Col4a6B1AVK5 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col4a6B1AVK5 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.8■□□□□ 0.44
Col4a6B1AVK5 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col4a6B1AVK5 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Col4a6B1AVK5 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col4a6B1AVK5 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Col4a6B1AVK5 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Col4a6B1AVK5 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC17.8■□□□□ 0.44
Col4a6B1AVK5 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC17.8■□□□□ 0.44
Col4a6B1AVK5 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Col4a6B1AVK5 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Col4a6B1AVK5 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Col4a6B1AVK5 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col4a6B1AVK5 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col4a6B1AVK5 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col4a6B1AVK5 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col4a6B1AVK5 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Col4a6B1AVK5 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col4a6B1AVK5 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col4a6B1AVK5 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Col4a6B1AVK5 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col4a6B1AVK5 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col4a6B1AVK5 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col4a6B1AVK5 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms