Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gm11127A7VMS2 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gm11127A7VMS2 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gm11127A7VMS2 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC15.35■□□□□ 0.05
Gm11127A7VMS2 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Gm11127A7VMS2 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Gm11127A7VMS2 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Gm11127A7VMS2 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm11127A7VMS2 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm11127A7VMS2 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm11127A7VMS2 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.34■□□□□ 0.05
Gm11127A7VMS2 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC15.34■□□□□ 0.05
Gm11127A7VMS2 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm11127A7VMS2 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm11127A7VMS2 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm11127A7VMS2 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC15.34■□□□□ 0.05
Gm11127A7VMS2 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC15.34■□□□□ 0.05
Gm11127A7VMS2 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Gm11127A7VMS2 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Gm11127A7VMS2 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm11127A7VMS2 AV356131-201ENSMUST00000206201 750 ntBASIC15.34■□□□□ 0.05
Gm11127A7VMS2 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm11127A7VMS2 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Gm11127A7VMS2 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm11127A7VMS2 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Gm11127A7VMS2 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm11127A7VMS2 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm11127A7VMS2 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Gm11127A7VMS2 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Gm11127A7VMS2 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm11127A7VMS2 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm11127A7VMS2 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm11127A7VMS2 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Gm11127A7VMS2 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm11127A7VMS2 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Gm11127A7VMS2 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.05
Gm11127A7VMS2 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.33■□□□□ 0.05
Gm11127A7VMS2 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm11127A7VMS2 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm11127A7VMS2 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.33■□□□□ 0.04
Gm11127A7VMS2 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm11127A7VMS2 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC15.33■□□□□ 0.04
Gm11127A7VMS2 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC15.33■□□□□ 0.04
Gm11127A7VMS2 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC15.33■□□□□ 0.04
Gm11127A7VMS2 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm11127A7VMS2 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm11127A7VMS2 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm11127A7VMS2 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm11127A7VMS2 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm11127A7VMS2 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm11127A7VMS2 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm11127A7VMS2 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm11127A7VMS2 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm11127A7VMS2 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm11127A7VMS2 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.33■□□□□ 0.04
Gm11127A7VMS2 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm11127A7VMS2 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm11127A7VMS2 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Gm11127A7VMS2 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC15.32■□□□□ 0.04
Gm11127A7VMS2 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Gm11127A7VMS2 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm11127A7VMS2 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm11127A7VMS2 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.32■□□□□ 0.04
Gm11127A7VMS2 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm11127A7VMS2 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm11127A7VMS2 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm11127A7VMS2 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm11127A7VMS2 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm11127A7VMS2 Tgds-204ENSMUST00000228543 1594 ntBASIC15.32■□□□□ 0.04
Gm11127A7VMS2 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm11127A7VMS2 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Gm11127A7VMS2 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Gm11127A7VMS2 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm11127A7VMS2 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm11127A7VMS2 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm11127A7VMS2 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Gm11127A7VMS2 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC15.31■□□□□ 0.04
Gm11127A7VMS2 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
Gm11127A7VMS2 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Gm11127A7VMS2 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm11127A7VMS2 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm11127A7VMS2 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm11127A7VMS2 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Gm11127A7VMS2 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Gm11127A7VMS2 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC15.31■□□□□ 0.04
Gm11127A7VMS2 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm11127A7VMS2 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Gm11127A7VMS2 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm11127A7VMS2 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm11127A7VMS2 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm11127A7VMS2 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm11127A7VMS2 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Gm11127A7VMS2 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm11127A7VMS2 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm11127A7VMS2 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.3■□□□□ 0.04
Gm11127A7VMS2 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Gm11127A7VMS2 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Gm11127A7VMS2 Gm13216-201ENSMUST00000117145 591 ntBASIC15.3■□□□□ 0.04
Gm11127A7VMS2 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC15.3■□□□□ 0.04
Gm11127A7VMS2 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms