Protein–RNA interactions for Protein: A6BLY7

Krt28, Keratin, type I cytoskeletal 28, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt28A6BLY7 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC19.18■□□□□ 0.66
Krt28A6BLY7 Gm2651-201ENSMUST00000203560 838 ntBASIC19.18■□□□□ 0.66
Krt28A6BLY7 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt28A6BLY7 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt28A6BLY7 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt28A6BLY7 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt28A6BLY7 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt28A6BLY7 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Krt28A6BLY7 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Krt28A6BLY7 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Krt28A6BLY7 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Krt28A6BLY7 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Krt28A6BLY7 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Krt28A6BLY7 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC19.17■□□□□ 0.66
Krt28A6BLY7 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.17■□□□□ 0.66
Krt28A6BLY7 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Krt28A6BLY7 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Krt28A6BLY7 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Krt28A6BLY7 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Krt28A6BLY7 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC19.17■□□□□ 0.66
Krt28A6BLY7 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Krt28A6BLY7 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Krt28A6BLY7 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Krt28A6BLY7 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Krt28A6BLY7 BC021767-201ENSMUST00000126387 1716 ntBASIC19.17■□□□□ 0.66
Krt28A6BLY7 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Krt28A6BLY7 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Krt28A6BLY7 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC19.16■□□□□ 0.66
Krt28A6BLY7 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Krt28A6BLY7 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Krt28A6BLY7 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Krt28A6BLY7 Gm7935-201ENSMUST00000100555 1278 ntBASIC19.16■□□□□ 0.66
Krt28A6BLY7 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Krt28A6BLY7 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Krt28A6BLY7 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Krt28A6BLY7 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Krt28A6BLY7 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Krt28A6BLY7 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Krt28A6BLY7 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Krt28A6BLY7 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Krt28A6BLY7 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Krt28A6BLY7 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Krt28A6BLY7 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Krt28A6BLY7 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Krt28A6BLY7 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Krt28A6BLY7 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Krt28A6BLY7 Gm11336-201ENSMUST00000118168 334 ntBASIC19.15■□□□□ 0.66
Krt28A6BLY7 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Krt28A6BLY7 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Krt28A6BLY7 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Krt28A6BLY7 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Krt28A6BLY7 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Krt28A6BLY7 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Krt28A6BLY7 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Krt28A6BLY7 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Krt28A6BLY7 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Krt28A6BLY7 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Krt28A6BLY7 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Krt28A6BLY7 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Krt28A6BLY7 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Krt28A6BLY7 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Krt28A6BLY7 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Krt28A6BLY7 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Krt28A6BLY7 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Krt28A6BLY7 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Krt28A6BLY7 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Krt28A6BLY7 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Krt28A6BLY7 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC19.14■□□□□ 0.65
Krt28A6BLY7 Rps4l-201ENSMUST00000071745 943 ntBASIC19.14■□□□□ 0.65
Krt28A6BLY7 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC19.14■□□□□ 0.65
Krt28A6BLY7 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Krt28A6BLY7 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC19.14■□□□□ 0.65
Krt28A6BLY7 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Krt28A6BLY7 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Krt28A6BLY7 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Krt28A6BLY7 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Krt28A6BLY7 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Krt28A6BLY7 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Krt28A6BLY7 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Krt28A6BLY7 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.14■□□□□ 0.65
Krt28A6BLY7 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Krt28A6BLY7 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Krt28A6BLY7 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.13■□□□□ 0.65
Krt28A6BLY7 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Krt28A6BLY7 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Krt28A6BLY7 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Krt28A6BLY7 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Krt28A6BLY7 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC19.13■□□□□ 0.65
Krt28A6BLY7 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC19.13■□□□□ 0.65
Krt28A6BLY7 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC19.13■□□□□ 0.65
Krt28A6BLY7 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Krt28A6BLY7 AC108846.1-201ENSMUST00000214531 513 ntBASIC19.13■□□□□ 0.65
Krt28A6BLY7 AC161829.1-201ENSMUST00000220298 281 ntBASIC19.13■□□□□ 0.65
Krt28A6BLY7 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC19.13■□□□□ 0.65
Krt28A6BLY7 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC19.13■□□□□ 0.65
Krt28A6BLY7 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Krt28A6BLY7 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Krt28A6BLY7 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Krt28A6BLY7 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.13■□□□□ 0.65
Krt28A6BLY7 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms