Protein–RNA interactions for Protein: A3KMP2

Ttc38, Tetratricopeptide repeat protein 38, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc38A3KMP2 Gm8520-201ENSMUST00000186517 868 ntBASIC18.85■□□□□ 0.61
Ttc38A3KMP2 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ttc38A3KMP2 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.85■□□□□ 0.61
Ttc38A3KMP2 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ttc38A3KMP2 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Ttc38A3KMP2 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Ttc38A3KMP2 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ttc38A3KMP2 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ttc38A3KMP2 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ttc38A3KMP2 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ttc38A3KMP2 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Ttc38A3KMP2 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ttc38A3KMP2 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ttc38A3KMP2 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ttc38A3KMP2 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ttc38A3KMP2 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ttc38A3KMP2 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ttc38A3KMP2 Gm24841-201ENSMUST00000158676 357 ntBASIC18.84■□□□□ 0.61
Ttc38A3KMP2 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.84■□□□□ 0.61
Ttc38A3KMP2 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.84■□□□□ 0.61
Ttc38A3KMP2 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ttc38A3KMP2 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ttc38A3KMP2 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Ttc38A3KMP2 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ttc38A3KMP2 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ttc38A3KMP2 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ttc38A3KMP2 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.84■□□□□ 0.61
Ttc38A3KMP2 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ttc38A3KMP2 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ttc38A3KMP2 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ttc38A3KMP2 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ttc38A3KMP2 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ttc38A3KMP2 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ttc38A3KMP2 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ttc38A3KMP2 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ttc38A3KMP2 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ttc38A3KMP2 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Ttc38A3KMP2 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ttc38A3KMP2 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ttc38A3KMP2 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ttc38A3KMP2 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ttc38A3KMP2 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.82■□□□□ 0.6
Ttc38A3KMP2 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.82■□□□□ 0.6
Ttc38A3KMP2 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ttc38A3KMP2 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ttc38A3KMP2 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ttc38A3KMP2 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ttc38A3KMP2 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.82■□□□□ 0.6
Ttc38A3KMP2 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Ttc38A3KMP2 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ttc38A3KMP2 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ttc38A3KMP2 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Ttc38A3KMP2 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Ttc38A3KMP2 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ttc38A3KMP2 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ttc38A3KMP2 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ttc38A3KMP2 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ttc38A3KMP2 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ttc38A3KMP2 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ttc38A3KMP2 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ttc38A3KMP2 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ttc38A3KMP2 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Ttc38A3KMP2 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ttc38A3KMP2 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.81■□□□□ 0.6
Ttc38A3KMP2 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Ttc38A3KMP2 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Ttc38A3KMP2 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ttc38A3KMP2 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ttc38A3KMP2 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Ttc38A3KMP2 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ttc38A3KMP2 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Ttc38A3KMP2 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ttc38A3KMP2 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ttc38A3KMP2 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ttc38A3KMP2 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ttc38A3KMP2 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ttc38A3KMP2 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC18.8■□□□□ 0.6
Ttc38A3KMP2 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ttc38A3KMP2 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ttc38A3KMP2 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.8■□□□□ 0.6
Ttc38A3KMP2 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.8■□□□□ 0.6
Ttc38A3KMP2 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ttc38A3KMP2 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ttc38A3KMP2 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.8■□□□□ 0.6
Ttc38A3KMP2 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ttc38A3KMP2 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ttc38A3KMP2 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Ttc38A3KMP2 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ttc38A3KMP2 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ttc38A3KMP2 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Ttc38A3KMP2 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ttc38A3KMP2 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ttc38A3KMP2 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ttc38A3KMP2 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ttc38A3KMP2 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ttc38A3KMP2 Mir1199-201ENSMUST00000117015 119 ntBASIC18.79■□□□□ 0.6
Ttc38A3KMP2 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.79■□□□□ 0.6
Ttc38A3KMP2 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ttc38A3KMP2 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.79■□□□□ 0.6
Ttc38A3KMP2 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms