Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Gm5540-201ENSMUST00000131852 1848 ntBASIC14.1□□□□□ -0.15
Chd6A3KFM7 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chd6A3KFM7 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.1□□□□□ -0.15
Chd6A3KFM7 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chd6A3KFM7 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chd6A3KFM7 Notumos-201ENSMUST00000151998 2659 ntBASIC14.1□□□□□ -0.15
Chd6A3KFM7 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Chd6A3KFM7 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Chd6A3KFM7 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Chd6A3KFM7 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Chd6A3KFM7 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chd6A3KFM7 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chd6A3KFM7 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chd6A3KFM7 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chd6A3KFM7 Gm27867-201ENSMUST00000184778 125 ntBASIC14.09□□□□□ -0.15
Chd6A3KFM7 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Chd6A3KFM7 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chd6A3KFM7 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Chd6A3KFM7 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC14.09□□□□□ -0.15
Chd6A3KFM7 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chd6A3KFM7 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Chd6A3KFM7 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chd6A3KFM7 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chd6A3KFM7 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chd6A3KFM7 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chd6A3KFM7 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Chd6A3KFM7 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Chd6A3KFM7 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Chd6A3KFM7 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.08□□□□□ -0.16
Chd6A3KFM7 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chd6A3KFM7 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chd6A3KFM7 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chd6A3KFM7 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.08□□□□□ -0.16
Chd6A3KFM7 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Chd6A3KFM7 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Chd6A3KFM7 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chd6A3KFM7 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.08□□□□□ -0.16
Chd6A3KFM7 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Chd6A3KFM7 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chd6A3KFM7 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chd6A3KFM7 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chd6A3KFM7 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Chd6A3KFM7 Gm13616-201ENSMUST00000120600 222 ntBASIC14.07□□□□□ -0.16
Chd6A3KFM7 Gm15173-201ENSMUST00000122049 433 ntBASIC14.07□□□□□ -0.16
Chd6A3KFM7 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Chd6A3KFM7 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Chd6A3KFM7 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC14.07□□□□□ -0.16
Chd6A3KFM7 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Chd6A3KFM7 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Chd6A3KFM7 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chd6A3KFM7 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.07□□□□□ -0.16
Chd6A3KFM7 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.07□□□□□ -0.16
Chd6A3KFM7 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chd6A3KFM7 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chd6A3KFM7 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chd6A3KFM7 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chd6A3KFM7 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Chd6A3KFM7 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chd6A3KFM7 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chd6A3KFM7 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
Chd6A3KFM7 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chd6A3KFM7 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Chd6A3KFM7 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC14.06□□□□□ -0.16
Chd6A3KFM7 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC14.06□□□□□ -0.16
Chd6A3KFM7 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Chd6A3KFM7 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC14.06□□□□□ -0.16
Chd6A3KFM7 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chd6A3KFM7 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chd6A3KFM7 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chd6A3KFM7 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Chd6A3KFM7 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Chd6A3KFM7 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC14.06□□□□□ -0.16
Chd6A3KFM7 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chd6A3KFM7 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chd6A3KFM7 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chd6A3KFM7 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chd6A3KFM7 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chd6A3KFM7 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Chd6A3KFM7 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Chd6A3KFM7 Rncr4-201ENSMUST00000194541 2234 ntBASIC14.06□□□□□ -0.16
Chd6A3KFM7 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chd6A3KFM7 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chd6A3KFM7 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.06□□□□□ -0.16
Chd6A3KFM7 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Chd6A3KFM7 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Chd6A3KFM7 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Chd6A3KFM7 Rprl3-201ENSMUST00000157400 290 ntBASIC14.06□□□□□ -0.16
Chd6A3KFM7 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Chd6A3KFM7 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chd6A3KFM7 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chd6A3KFM7 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Chd6A3KFM7 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Chd6A3KFM7 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chd6A3KFM7 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Chd6A3KFM7 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Chd6A3KFM7 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.05□□□□□ -0.16
Chd6A3KFM7 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC14.05□□□□□ -0.16
Chd6A3KFM7 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Chd6A3KFM7 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC14.05□□□□□ -0.16
Chd6A3KFM7 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms