Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC9.16□□□□□ -0.94
Ubr4A2AN08 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC9.16□□□□□ -0.94
Ubr4A2AN08 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ubr4A2AN08 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ubr4A2AN08 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Ubr4A2AN08 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Ubr4A2AN08 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC9.16□□□□□ -0.94
Ubr4A2AN08 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC9.16□□□□□ -0.94
Ubr4A2AN08 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC9.16□□□□□ -0.94
Ubr4A2AN08 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC9.16□□□□□ -0.94
Ubr4A2AN08 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ubr4A2AN08 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ubr4A2AN08 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Ubr4A2AN08 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Ubr4A2AN08 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ubr4A2AN08 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
Ubr4A2AN08 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ubr4A2AN08 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Ubr4A2AN08 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ubr4A2AN08 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC9.16□□□□□ -0.94
Ubr4A2AN08 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Ubr4A2AN08 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Ubr4A2AN08 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Ubr4A2AN08 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ubr4A2AN08 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Ubr4A2AN08 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC9.15□□□□□ -0.94
Ubr4A2AN08 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Ubr4A2AN08 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC9.15□□□□□ -0.94
Ubr4A2AN08 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ubr4A2AN08 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.94
Ubr4A2AN08 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ubr4A2AN08 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC9.15□□□□□ -0.94
Ubr4A2AN08 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ubr4A2AN08 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Ubr4A2AN08 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ubr4A2AN08 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Ubr4A2AN08 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Ubr4A2AN08 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ubr4A2AN08 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Ubr4A2AN08 Gm12428-201ENSMUST00000119844 727 ntBASIC9.15□□□□□ -0.94
Ubr4A2AN08 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC9.15□□□□□ -0.94
Ubr4A2AN08 AC153794.1-201ENSMUST00000169148 126 ntBASIC9.15□□□□□ -0.94
Ubr4A2AN08 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Ubr4A2AN08 AC125206.2-201ENSMUST00000217454 574 ntBASIC9.15□□□□□ -0.94
Ubr4A2AN08 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ubr4A2AN08 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Ubr4A2AN08 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC9.15□□□□□ -0.95
Ubr4A2AN08 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC9.15□□□□□ -0.95
Ubr4A2AN08 AC108858.1-201ENSMUST00000228461 1498 ntBASIC9.15□□□□□ -0.95
Ubr4A2AN08 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Ubr4A2AN08 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Ubr4A2AN08 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Ubr4A2AN08 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.95
Ubr4A2AN08 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Ubr4A2AN08 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC9.15□□□□□ -0.95
Ubr4A2AN08 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Ubr4A2AN08 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC9.15□□□□□ -0.95
Ubr4A2AN08 Gm6266-201ENSMUST00000203844 806 ntBASIC9.15□□□□□ -0.95
Ubr4A2AN08 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ubr4A2AN08 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Ubr4A2AN08 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC9.14□□□□□ -0.95
Ubr4A2AN08 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC9.14□□□□□ -0.95
Ubr4A2AN08 Gm24841-201ENSMUST00000158676 357 ntBASIC9.14□□□□□ -0.95
Ubr4A2AN08 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ubr4A2AN08 Gm15590-201ENSMUST00000078419 552 ntBASIC9.14□□□□□ -0.95
Ubr4A2AN08 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Ubr4A2AN08 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Ubr4A2AN08 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ubr4A2AN08 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC9.14□□□□□ -0.95
Ubr4A2AN08 Gm4913-201ENSMUST00000117075 1290 ntBASIC9.14□□□□□ -0.95
Ubr4A2AN08 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC9.14□□□□□ -0.95
Ubr4A2AN08 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ubr4A2AN08 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Ubr4A2AN08 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ubr4A2AN08 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC9.14□□□□□ -0.95
Ubr4A2AN08 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ubr4A2AN08 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Ubr4A2AN08 Mir7085-201ENSMUST00000184353 66 ntBASIC9.14□□□□□ -0.95
Ubr4A2AN08 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Ubr4A2AN08 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC9.14□□□□□ -0.95
Ubr4A2AN08 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ubr4A2AN08 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ubr4A2AN08 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ubr4A2AN08 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ubr4A2AN08 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ubr4A2AN08 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC9.14□□□□□ -0.95
Ubr4A2AN08 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC9.14□□□□□ -0.95
Ubr4A2AN08 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Ubr4A2AN08 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Ubr4A2AN08 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Ubr4A2AN08 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ubr4A2AN08 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ubr4A2AN08 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC9.13□□□□□ -0.95
Ubr4A2AN08 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ubr4A2AN08 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ubr4A2AN08 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Ubr4A2AN08 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC9.13□□□□□ -0.95
Ubr4A2AN08 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Ubr4A2AN08 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC9.13□□□□□ -0.95
Ubr4A2AN08 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms