Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC27.4■■□□□ 1.98
Shroom2A2ALU4 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Shroom2A2ALU4 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC27.4■■□□□ 1.98
Shroom2A2ALU4 AC084391.1-201ENSMUST00000200651 141 ntBASIC27.4■■□□□ 1.98
Shroom2A2ALU4 AV026068-213ENSMUST00000223675 1171 ntBASIC27.4■■□□□ 1.98
Shroom2A2ALU4 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC27.4■■□□□ 1.98
Shroom2A2ALU4 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Shroom2A2ALU4 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Shroom2A2ALU4 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC27.4■■□□□ 1.98
Shroom2A2ALU4 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Shroom2A2ALU4 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Shroom2A2ALU4 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
Shroom2A2ALU4 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Shroom2A2ALU4 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
Shroom2A2ALU4 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC27.39■■□□□ 1.98
Shroom2A2ALU4 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC27.39■■□□□ 1.98
Shroom2A2ALU4 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC27.39■■□□□ 1.98
Shroom2A2ALU4 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC27.39■■□□□ 1.98
Shroom2A2ALU4 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Shroom2A2ALU4 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Shroom2A2ALU4 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
Shroom2A2ALU4 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Shroom2A2ALU4 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
Shroom2A2ALU4 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC27.39■■□□□ 1.97
Shroom2A2ALU4 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
Shroom2A2ALU4 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Shroom2A2ALU4 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
Shroom2A2ALU4 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC27.38■■□□□ 1.97
Shroom2A2ALU4 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC27.38■■□□□ 1.97
Shroom2A2ALU4 Gm6089-201ENSMUST00000197666 938 ntBASIC27.38■■□□□ 1.97
Shroom2A2ALU4 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
Shroom2A2ALU4 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
Shroom2A2ALU4 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
Shroom2A2ALU4 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Shroom2A2ALU4 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
Shroom2A2ALU4 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
Shroom2A2ALU4 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC27.38■■□□□ 1.97
Shroom2A2ALU4 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Shroom2A2ALU4 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC27.38■■□□□ 1.97
Shroom2A2ALU4 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
Shroom2A2ALU4 Gm14701-201ENSMUST00000117156 348 ntBASIC27.38■■□□□ 1.97
Shroom2A2ALU4 Gm15173-201ENSMUST00000122049 433 ntBASIC27.38■■□□□ 1.97
Shroom2A2ALU4 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC27.38■■□□□ 1.97
Shroom2A2ALU4 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC27.38■■□□□ 1.97
Shroom2A2ALU4 Gm29791-202ENSMUST00000207888 369 ntBASIC27.38■■□□□ 1.97
Shroom2A2ALU4 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
Shroom2A2ALU4 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Shroom2A2ALU4 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC27.37■■□□□ 1.97
Shroom2A2ALU4 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC27.37■■□□□ 1.97
Shroom2A2ALU4 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC27.37■■□□□ 1.97
Shroom2A2ALU4 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC27.37■■□□□ 1.97
Shroom2A2ALU4 CT009713.7-201ENSMUST00000224689 571 ntBASIC27.37■■□□□ 1.97
Shroom2A2ALU4 Gm8396-201ENSMUST00000057361 823 ntBASIC27.37■■□□□ 1.97
Shroom2A2ALU4 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Shroom2A2ALU4 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Shroom2A2ALU4 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Shroom2A2ALU4 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC27.36■■□□□ 1.97
Shroom2A2ALU4 Gm7856-201ENSMUST00000117514 1493 ntBASIC27.36■■□□□ 1.97
Shroom2A2ALU4 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Shroom2A2ALU4 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
Shroom2A2ALU4 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC27.36■■□□□ 1.97
Shroom2A2ALU4 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Shroom2A2ALU4 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Shroom2A2ALU4 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Shroom2A2ALU4 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC27.35■■□□□ 1.97
Shroom2A2ALU4 Gm11336-201ENSMUST00000118168 334 ntBASIC27.35■■□□□ 1.97
Shroom2A2ALU4 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC27.35■■□□□ 1.97
Shroom2A2ALU4 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC27.35■■□□□ 1.97
Shroom2A2ALU4 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Shroom2A2ALU4 H2af-ps-201ENSMUST00000119066 295 ntBASIC27.34■■□□□ 1.97
Shroom2A2ALU4 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC27.34■■□□□ 1.97
Shroom2A2ALU4 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Shroom2A2ALU4 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC27.34■■□□□ 1.97
Shroom2A2ALU4 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Shroom2A2ALU4 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC27.34■■□□□ 1.97
Shroom2A2ALU4 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC27.34■■□□□ 1.97
Shroom2A2ALU4 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC27.34■■□□□ 1.97
Shroom2A2ALU4 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Shroom2A2ALU4 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Shroom2A2ALU4 Gm11025-201ENSMUST00000140773 466 ntBASIC27.33■■□□□ 1.97
Shroom2A2ALU4 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Shroom2A2ALU4 Gm37171-201ENSMUST00000192636 1185 ntBASIC27.33■■□□□ 1.97
Shroom2A2ALU4 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Shroom2A2ALU4 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Shroom2A2ALU4 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC27.33■■□□□ 1.97
Shroom2A2ALU4 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC27.33■■□□□ 1.97
Shroom2A2ALU4 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC27.33■■□□□ 1.97
Shroom2A2ALU4 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC27.33■■□□□ 1.97
Shroom2A2ALU4 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Shroom2A2ALU4 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
Shroom2A2ALU4 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Shroom2A2ALU4 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC27.33■■□□□ 1.96
Shroom2A2ALU4 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Shroom2A2ALU4 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC27.32■■□□□ 1.96
Shroom2A2ALU4 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC27.32■■□□□ 1.96
Shroom2A2ALU4 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC27.32■■□□□ 1.96
Shroom2A2ALU4 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC27.32■■□□□ 1.96
Shroom2A2ALU4 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC27.32■■□□□ 1.96
Shroom2A2ALU4 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC27.32■■□□□ 1.96
Shroom2A2ALU4 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms