Protein–RNA interactions for Protein: A2ALK8

Ptpn3, Tyrosine-protein phosphatase non-receptor type 3, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpn3A2ALK8 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ptpn3A2ALK8 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ptpn3A2ALK8 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Ptpn3A2ALK8 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ptpn3A2ALK8 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Ptpn3A2ALK8 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ptpn3A2ALK8 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.33■□□□□ 0.53
Ptpn3A2ALK8 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.33■□□□□ 0.53
Ptpn3A2ALK8 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ptpn3A2ALK8 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ptpn3A2ALK8 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ptpn3A2ALK8 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ptpn3A2ALK8 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ptpn3A2ALK8 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.33■□□□□ 0.52
Ptpn3A2ALK8 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ptpn3A2ALK8 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ptpn3A2ALK8 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ptpn3A2ALK8 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ptpn3A2ALK8 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ptpn3A2ALK8 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.33■□□□□ 0.52
Ptpn3A2ALK8 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.32■□□□□ 0.52
Ptpn3A2ALK8 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ptpn3A2ALK8 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ptpn3A2ALK8 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Ptpn3A2ALK8 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ptpn3A2ALK8 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ptpn3A2ALK8 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ptpn3A2ALK8 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ptpn3A2ALK8 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.32■□□□□ 0.52
Ptpn3A2ALK8 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.32■□□□□ 0.52
Ptpn3A2ALK8 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ptpn3A2ALK8 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ptpn3A2ALK8 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ptpn3A2ALK8 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Ptpn3A2ALK8 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.32■□□□□ 0.52
Ptpn3A2ALK8 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Ptpn3A2ALK8 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.32■□□□□ 0.52
Ptpn3A2ALK8 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ptpn3A2ALK8 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ptpn3A2ALK8 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Ptpn3A2ALK8 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.31■□□□□ 0.52
Ptpn3A2ALK8 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ptpn3A2ALK8 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ptpn3A2ALK8 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ptpn3A2ALK8 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ptpn3A2ALK8 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ptpn3A2ALK8 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ptpn3A2ALK8 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ptpn3A2ALK8 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ptpn3A2ALK8 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Ptpn3A2ALK8 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ptpn3A2ALK8 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Ptpn3A2ALK8 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ptpn3A2ALK8 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ptpn3A2ALK8 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ptpn3A2ALK8 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ptpn3A2ALK8 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ptpn3A2ALK8 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Ptpn3A2ALK8 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ptpn3A2ALK8 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Ptpn3A2ALK8 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.3■□□□□ 0.52
Ptpn3A2ALK8 Gm2274-201ENSMUST00000184539 609 ntBASIC18.3■□□□□ 0.52
Ptpn3A2ALK8 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Ptpn3A2ALK8 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.3■□□□□ 0.52
Ptpn3A2ALK8 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.3■□□□□ 0.52
Ptpn3A2ALK8 Gm9987-201ENSMUST00000069768 567 ntBASIC18.3■□□□□ 0.52
Ptpn3A2ALK8 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ptpn3A2ALK8 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.3■□□□□ 0.52
Ptpn3A2ALK8 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.3■□□□□ 0.52
Ptpn3A2ALK8 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Ptpn3A2ALK8 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ptpn3A2ALK8 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ptpn3A2ALK8 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ptpn3A2ALK8 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ptpn3A2ALK8 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Ptpn3A2ALK8 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ptpn3A2ALK8 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ptpn3A2ALK8 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Ptpn3A2ALK8 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Ptpn3A2ALK8 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Ptpn3A2ALK8 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Ptpn3A2ALK8 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Ptpn3A2ALK8 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.29■□□□□ 0.52
Ptpn3A2ALK8 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Ptpn3A2ALK8 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.29■□□□□ 0.52
Ptpn3A2ALK8 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Ptpn3A2ALK8 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Ptpn3A2ALK8 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ptpn3A2ALK8 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ptpn3A2ALK8 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ptpn3A2ALK8 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.29■□□□□ 0.52
Ptpn3A2ALK8 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ptpn3A2ALK8 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ptpn3A2ALK8 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ptpn3A2ALK8 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ptpn3A2ALK8 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ptpn3A2ALK8 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ptpn3A2ALK8 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ptpn3A2ALK8 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.28■□□□□ 0.52
Ptpn3A2ALK8 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms