Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav12d-1A0N8R0 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav12d-1A0N8R0 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav12d-1A0N8R0 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav12d-1A0N8R0 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Trav12d-1A0N8R0 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Trav12d-1A0N8R0 Gm11841-201ENSMUST00000117060 1963 ntBASIC13.95□□□□□ -0.18
Trav12d-1A0N8R0 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav12d-1A0N8R0 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav12d-1A0N8R0 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav12d-1A0N8R0 Gm44549-201ENSMUST00000208351 577 ntBASIC13.95□□□□□ -0.18
Trav12d-1A0N8R0 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav12d-1A0N8R0 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trav12d-1A0N8R0 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav12d-1A0N8R0 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav12d-1A0N8R0 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav12d-1A0N8R0 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav12d-1A0N8R0 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trav12d-1A0N8R0 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav12d-1A0N8R0 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav12d-1A0N8R0 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav12d-1A0N8R0 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav12d-1A0N8R0 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trav12d-1A0N8R0 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav12d-1A0N8R0 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav12d-1A0N8R0 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Trav12d-1A0N8R0 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC13.94□□□□□ -0.18
Trav12d-1A0N8R0 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Trav12d-1A0N8R0 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav12d-1A0N8R0 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav12d-1A0N8R0 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Trav12d-1A0N8R0 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trav12d-1A0N8R0 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC13.94□□□□□ -0.18
Trav12d-1A0N8R0 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav12d-1A0N8R0 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav12d-1A0N8R0 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav12d-1A0N8R0 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav12d-1A0N8R0 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav12d-1A0N8R0 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Trav12d-1A0N8R0 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Trav12d-1A0N8R0 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav12d-1A0N8R0 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav12d-1A0N8R0 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC13.93□□□□□ -0.18
Trav12d-1A0N8R0 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Trav12d-1A0N8R0 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav12d-1A0N8R0 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav12d-1A0N8R0 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav12d-1A0N8R0 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav12d-1A0N8R0 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav12d-1A0N8R0 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Trav12d-1A0N8R0 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav12d-1A0N8R0 Gm13401-201ENSMUST00000117074 291 ntBASIC13.93□□□□□ -0.18
Trav12d-1A0N8R0 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav12d-1A0N8R0 Gm42642-201ENSMUST00000200683 355 ntBASIC13.93□□□□□ -0.18
Trav12d-1A0N8R0 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC13.93□□□□□ -0.18
Trav12d-1A0N8R0 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav12d-1A0N8R0 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav12d-1A0N8R0 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav12d-1A0N8R0 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Trav12d-1A0N8R0 Gm37166-201ENSMUST00000195473 2474 ntBASIC13.93□□□□□ -0.18
Trav12d-1A0N8R0 Gm16499-203ENSMUST00000204633 2177 ntBASIC13.93□□□□□ -0.18
Trav12d-1A0N8R0 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav12d-1A0N8R0 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav12d-1A0N8R0 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav12d-1A0N8R0 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav12d-1A0N8R0 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trav12d-1A0N8R0 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav12d-1A0N8R0 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav12d-1A0N8R0 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav12d-1A0N8R0 Gm11620-201ENSMUST00000118770 1845 ntBASIC13.92□□□□□ -0.18
Trav12d-1A0N8R0 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav12d-1A0N8R0 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav12d-1A0N8R0 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav12d-1A0N8R0 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav12d-1A0N8R0 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav12d-1A0N8R0 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav12d-1A0N8R0 Gm6211-202ENSMUST00000167849 925 ntBASIC13.92□□□□□ -0.18
Trav12d-1A0N8R0 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trav12d-1A0N8R0 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Trav12d-1A0N8R0 AV356131-201ENSMUST00000206201 750 ntBASIC13.92□□□□□ -0.18
Trav12d-1A0N8R0 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC13.92□□□□□ -0.18
Trav12d-1A0N8R0 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav12d-1A0N8R0 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav12d-1A0N8R0 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav12d-1A0N8R0 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav12d-1A0N8R0 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav12d-1A0N8R0 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav12d-1A0N8R0 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trav12d-1A0N8R0 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav12d-1A0N8R0 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav12d-1A0N8R0 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav12d-1A0N8R0 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Trav12d-1A0N8R0 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav12d-1A0N8R0 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Trav12d-1A0N8R0 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav12d-1A0N8R0 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav12d-1A0N8R0 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav12d-1A0N8R0 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav12d-1A0N8R0 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav12d-1A0N8R0 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms