Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Gm3854A0A1B0GSS6 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm3854A0A1B0GSS6 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Gm3854A0A1B0GSS6 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm3854A0A1B0GSS6 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm3854A0A1B0GSS6 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm3854A0A1B0GSS6 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm3854A0A1B0GSS6 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Gm3854A0A1B0GSS6 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Gm3854A0A1B0GSS6 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Gm3854A0A1B0GSS6 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.34■□□□□ 0.37
Gm3854A0A1B0GSS6 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Gm3854A0A1B0GSS6 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm3854A0A1B0GSS6 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm3854A0A1B0GSS6 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm3854A0A1B0GSS6 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm3854A0A1B0GSS6 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Gm3854A0A1B0GSS6 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm3854A0A1B0GSS6 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm3854A0A1B0GSS6 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm3854A0A1B0GSS6 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Gm3854A0A1B0GSS6 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Gm3854A0A1B0GSS6 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.33■□□□□ 0.37
Gm3854A0A1B0GSS6 Idnk-204ENSMUST00000226010 1898 ntBASIC17.33■□□□□ 0.37
Gm3854A0A1B0GSS6 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Gm3854A0A1B0GSS6 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
Gm3854A0A1B0GSS6 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Gm3854A0A1B0GSS6 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Gm3854A0A1B0GSS6 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Gm3854A0A1B0GSS6 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm3854A0A1B0GSS6 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Gm3854A0A1B0GSS6 Gm11950-201ENSMUST00000121615 838 ntBASIC17.33■□□□□ 0.36
Gm3854A0A1B0GSS6 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC17.33■□□□□ 0.36
Gm3854A0A1B0GSS6 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.33■□□□□ 0.36
Gm3854A0A1B0GSS6 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm3854A0A1B0GSS6 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Gm3854A0A1B0GSS6 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm3854A0A1B0GSS6 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Gm3854A0A1B0GSS6 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm3854A0A1B0GSS6 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Gm3854A0A1B0GSS6 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Gm3854A0A1B0GSS6 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Gm3854A0A1B0GSS6 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm3854A0A1B0GSS6 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Gm3854A0A1B0GSS6 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm3854A0A1B0GSS6 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm3854A0A1B0GSS6 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.32■□□□□ 0.36
Gm3854A0A1B0GSS6 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Gm3854A0A1B0GSS6 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Gm3854A0A1B0GSS6 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm3854A0A1B0GSS6 Gm6623-201ENSMUST00000173570 544 ntBASIC17.32■□□□□ 0.36
Gm3854A0A1B0GSS6 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC17.32■□□□□ 0.36
Gm3854A0A1B0GSS6 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Gm3854A0A1B0GSS6 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm3854A0A1B0GSS6 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm3854A0A1B0GSS6 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm3854A0A1B0GSS6 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm3854A0A1B0GSS6 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm3854A0A1B0GSS6 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Gm3854A0A1B0GSS6 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm3854A0A1B0GSS6 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm3854A0A1B0GSS6 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.31■□□□□ 0.36
Gm3854A0A1B0GSS6 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.31■□□□□ 0.36
Gm3854A0A1B0GSS6 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Gm3854A0A1B0GSS6 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm3854A0A1B0GSS6 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm3854A0A1B0GSS6 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm3854A0A1B0GSS6 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.31■□□□□ 0.36
Gm3854A0A1B0GSS6 Gm18958-201ENSMUST00000174258 762 ntBASIC17.31■□□□□ 0.36
Gm3854A0A1B0GSS6 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Gm3854A0A1B0GSS6 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm3854A0A1B0GSS6 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm3854A0A1B0GSS6 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.31■□□□□ 0.36
Gm3854A0A1B0GSS6 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm3854A0A1B0GSS6 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.31■□□□□ 0.36
Gm3854A0A1B0GSS6 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Gm3854A0A1B0GSS6 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm3854A0A1B0GSS6 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Gm3854A0A1B0GSS6 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.3■□□□□ 0.36
Gm3854A0A1B0GSS6 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Gm3854A0A1B0GSS6 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm3854A0A1B0GSS6 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm3854A0A1B0GSS6 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm3854A0A1B0GSS6 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm3854A0A1B0GSS6 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.3■□□□□ 0.36
Gm3854A0A1B0GSS6 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm3854A0A1B0GSS6 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.3■□□□□ 0.36
Gm3854A0A1B0GSS6 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
Gm3854A0A1B0GSS6 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Gm3854A0A1B0GSS6 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Gm3854A0A1B0GSS6 Gm18669-201ENSMUST00000216049 778 ntBASIC17.3■□□□□ 0.36
Gm3854A0A1B0GSS6 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Gm3854A0A1B0GSS6 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.3■□□□□ 0.36
Gm3854A0A1B0GSS6 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Gm3854A0A1B0GSS6 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Gm3854A0A1B0GSS6 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Gm3854A0A1B0GSS6 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm3854A0A1B0GSS6 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Gm3854A0A1B0GSS6 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Gm3854A0A1B0GSS6 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms