Protein–RNA interactions for Protein: A0A140T8N7

Igkv6-25, Immunoglobulin kappa chain variable 6-25 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv6-25A0A140T8N7 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Igkv6-25A0A140T8N7 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Igkv6-25A0A140T8N7 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Igkv6-25A0A140T8N7 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Igkv6-25A0A140T8N7 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Igkv6-25A0A140T8N7 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.18■□□□□ 0.18
Igkv6-25A0A140T8N7 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Igkv6-25A0A140T8N7 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Igkv6-25A0A140T8N7 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Igkv6-25A0A140T8N7 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Igkv6-25A0A140T8N7 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Igkv6-25A0A140T8N7 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Igkv6-25A0A140T8N7 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Igkv6-25A0A140T8N7 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Igkv6-25A0A140T8N7 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Igkv6-25A0A140T8N7 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Igkv6-25A0A140T8N7 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.17■□□□□ 0.18
Igkv6-25A0A140T8N7 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Igkv6-25A0A140T8N7 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Igkv6-25A0A140T8N7 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Igkv6-25A0A140T8N7 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
Igkv6-25A0A140T8N7 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Igkv6-25A0A140T8N7 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.17■□□□□ 0.18
Igkv6-25A0A140T8N7 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Igkv6-25A0A140T8N7 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Igkv6-25A0A140T8N7 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Igkv6-25A0A140T8N7 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Igkv6-25A0A140T8N7 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Igkv6-25A0A140T8N7 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Igkv6-25A0A140T8N7 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Igkv6-25A0A140T8N7 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Igkv6-25A0A140T8N7 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
Igkv6-25A0A140T8N7 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Igkv6-25A0A140T8N7 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Igkv6-25A0A140T8N7 Gm9103-201ENSMUST00000119371 405 ntBASIC16.16■□□□□ 0.18
Igkv6-25A0A140T8N7 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.16■□□□□ 0.18
Igkv6-25A0A140T8N7 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Igkv6-25A0A140T8N7 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Igkv6-25A0A140T8N7 Gm37722-201ENSMUST00000193757 208 ntBASIC16.16■□□□□ 0.18
Igkv6-25A0A140T8N7 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Igkv6-25A0A140T8N7 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Igkv6-25A0A140T8N7 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Igkv6-25A0A140T8N7 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Igkv6-25A0A140T8N7 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Igkv6-25A0A140T8N7 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Igkv6-25A0A140T8N7 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Igkv6-25A0A140T8N7 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Igkv6-25A0A140T8N7 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Igkv6-25A0A140T8N7 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Igkv6-25A0A140T8N7 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Igkv6-25A0A140T8N7 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Igkv6-25A0A140T8N7 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Igkv6-25A0A140T8N7 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Igkv6-25A0A140T8N7 Gm11950-201ENSMUST00000121615 838 ntBASIC16.15■□□□□ 0.18
Igkv6-25A0A140T8N7 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.15■□□□□ 0.18
Igkv6-25A0A140T8N7 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.15■□□□□ 0.18
Igkv6-25A0A140T8N7 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Igkv6-25A0A140T8N7 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Igkv6-25A0A140T8N7 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Igkv6-25A0A140T8N7 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Igkv6-25A0A140T8N7 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Igkv6-25A0A140T8N7 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Igkv6-25A0A140T8N7 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Igkv6-25A0A140T8N7 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Igkv6-25A0A140T8N7 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Igkv6-25A0A140T8N7 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Igkv6-25A0A140T8N7 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Igkv6-25A0A140T8N7 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Igkv6-25A0A140T8N7 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Igkv6-25A0A140T8N7 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Igkv6-25A0A140T8N7 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Igkv6-25A0A140T8N7 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.14■□□□□ 0.17
Igkv6-25A0A140T8N7 Gm27000-201ENSMUST00000182943 842 ntBASIC16.14■□□□□ 0.17
Igkv6-25A0A140T8N7 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Igkv6-25A0A140T8N7 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Igkv6-25A0A140T8N7 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Igkv6-25A0A140T8N7 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Igkv6-25A0A140T8N7 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Igkv6-25A0A140T8N7 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Igkv6-25A0A140T8N7 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Igkv6-25A0A140T8N7 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Igkv6-25A0A140T8N7 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Igkv6-25A0A140T8N7 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Igkv6-25A0A140T8N7 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Igkv6-25A0A140T8N7 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Igkv6-25A0A140T8N7 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.13■□□□□ 0.17
Igkv6-25A0A140T8N7 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Igkv6-25A0A140T8N7 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Igkv6-25A0A140T8N7 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Igkv6-25A0A140T8N7 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Igkv6-25A0A140T8N7 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.13■□□□□ 0.17
Igkv6-25A0A140T8N7 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Igkv6-25A0A140T8N7 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Igkv6-25A0A140T8N7 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Igkv6-25A0A140T8N7 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.13■□□□□ 0.17
Igkv6-25A0A140T8N7 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Igkv6-25A0A140T8N7 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Igkv6-25A0A140T8N7 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Igkv6-25A0A140T8N7 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Igkv6-25A0A140T8N7 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms