Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Igkv1-88A0A140T8N1 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Igkv1-88A0A140T8N1 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Igkv1-88A0A140T8N1 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Igkv1-88A0A140T8N1 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Igkv1-88A0A140T8N1 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Igkv1-88A0A140T8N1 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Igkv1-88A0A140T8N1 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Igkv1-88A0A140T8N1 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Igkv1-88A0A140T8N1 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Igkv1-88A0A140T8N1 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Igkv1-88A0A140T8N1 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Igkv1-88A0A140T8N1 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Igkv1-88A0A140T8N1 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC11.47□□□□□ -0.57
Igkv1-88A0A140T8N1 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Igkv1-88A0A140T8N1 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Igkv1-88A0A140T8N1 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Igkv1-88A0A140T8N1 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Igkv1-88A0A140T8N1 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Igkv1-88A0A140T8N1 Gm26917-202ENSMUST00000192833 3329 ntBASIC11.47□□□□□ -0.57
Igkv1-88A0A140T8N1 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Igkv1-88A0A140T8N1 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Igkv1-88A0A140T8N1 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Igkv1-88A0A140T8N1 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Igkv1-88A0A140T8N1 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Igkv1-88A0A140T8N1 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Igkv1-88A0A140T8N1 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Igkv1-88A0A140T8N1 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Igkv1-88A0A140T8N1 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Igkv1-88A0A140T8N1 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Igkv1-88A0A140T8N1 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Igkv1-88A0A140T8N1 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Igkv1-88A0A140T8N1 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Igkv1-88A0A140T8N1 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Igkv1-88A0A140T8N1 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Igkv1-88A0A140T8N1 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Igkv1-88A0A140T8N1 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Igkv1-88A0A140T8N1 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Igkv1-88A0A140T8N1 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Igkv1-88A0A140T8N1 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Igkv1-88A0A140T8N1 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Igkv1-88A0A140T8N1 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Igkv1-88A0A140T8N1 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Igkv1-88A0A140T8N1 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Igkv1-88A0A140T8N1 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Igkv1-88A0A140T8N1 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Igkv1-88A0A140T8N1 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Igkv1-88A0A140T8N1 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Igkv1-88A0A140T8N1 Gm22325-201ENSMUST00000158904 308 ntBASIC11.46□□□□□ -0.57
Igkv1-88A0A140T8N1 Gm6420-201ENSMUST00000193885 723 ntBASIC11.46□□□□□ -0.57
Igkv1-88A0A140T8N1 Gm2011-201ENSMUST00000203124 1263 ntBASIC11.46□□□□□ -0.57
Igkv1-88A0A140T8N1 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Igkv1-88A0A140T8N1 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Igkv1-88A0A140T8N1 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Igkv1-88A0A140T8N1 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Igkv1-88A0A140T8N1 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Igkv1-88A0A140T8N1 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Igkv1-88A0A140T8N1 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Igkv1-88A0A140T8N1 Gm7292-201ENSMUST00000194706 2527 ntBASIC11.46□□□□□ -0.58
Igkv1-88A0A140T8N1 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC11.46□□□□□ -0.58
Igkv1-88A0A140T8N1 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Igkv1-88A0A140T8N1 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Igkv1-88A0A140T8N1 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.58
Igkv1-88A0A140T8N1 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Igkv1-88A0A140T8N1 Gm43338-201ENSMUST00000198617 2223 ntBASIC11.45□□□□□ -0.58
Igkv1-88A0A140T8N1 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Igkv1-88A0A140T8N1 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Igkv1-88A0A140T8N1 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC11.45□□□□□ -0.58
Igkv1-88A0A140T8N1 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Igkv1-88A0A140T8N1 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Igkv1-88A0A140T8N1 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Igkv1-88A0A140T8N1 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Igkv1-88A0A140T8N1 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC11.45□□□□□ -0.58
Igkv1-88A0A140T8N1 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Igkv1-88A0A140T8N1 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Igkv1-88A0A140T8N1 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Igkv1-88A0A140T8N1 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Igkv1-88A0A140T8N1 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC11.45□□□□□ -0.58
Igkv1-88A0A140T8N1 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC11.45□□□□□ -0.58
Igkv1-88A0A140T8N1 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC11.45□□□□□ -0.58
Igkv1-88A0A140T8N1 Gm43672-201ENSMUST00000199072 1731 ntBASIC11.45□□□□□ -0.58
Igkv1-88A0A140T8N1 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Igkv1-88A0A140T8N1 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Igkv1-88A0A140T8N1 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC11.45□□□□□ -0.58
Igkv1-88A0A140T8N1 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Igkv1-88A0A140T8N1 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Igkv1-88A0A140T8N1 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Igkv1-88A0A140T8N1 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Igkv1-88A0A140T8N1 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Igkv1-88A0A140T8N1 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Igkv1-88A0A140T8N1 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Igkv1-88A0A140T8N1 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Igkv1-88A0A140T8N1 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Igkv1-88A0A140T8N1 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Igkv1-88A0A140T8N1 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Igkv1-88A0A140T8N1 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Igkv1-88A0A140T8N1 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC11.44□□□□□ -0.58
Igkv1-88A0A140T8N1 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Igkv1-88A0A140T8N1 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Igkv1-88A0A140T8N1 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms