Protein–RNA interactions for Protein: A0A140LHH9

Gm35339, Predicted gene, 35339, mousemouse

Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm35339A0A140LHH9 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC36.4■■■■□ 3.42
Gm35339A0A140LHH9 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC36.4■■■■□ 3.42
Gm35339A0A140LHH9 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC36.39■■■■□ 3.42
Gm35339A0A140LHH9 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC36.39■■■■□ 3.42
Gm35339A0A140LHH9 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC36.39■■■■□ 3.42
Gm35339A0A140LHH9 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC36.39■■■■□ 3.42
Gm35339A0A140LHH9 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC36.39■■■■□ 3.42
Gm35339A0A140LHH9 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC36.39■■■■□ 3.42
Gm35339A0A140LHH9 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC36.39■■■■□ 3.42
Gm35339A0A140LHH9 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC36.38■■■■□ 3.42
Gm35339A0A140LHH9 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC36.38■■■■□ 3.41
Gm35339A0A140LHH9 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC36.38■■■■□ 3.41
Gm35339A0A140LHH9 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC36.38■■■■□ 3.41
Gm35339A0A140LHH9 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC36.38■■■■□ 3.41
Gm35339A0A140LHH9 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC36.38■■■■□ 3.41
Gm35339A0A140LHH9 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC36.38■■■■□ 3.41
Gm35339A0A140LHH9 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC36.38■■■■□ 3.41
Gm35339A0A140LHH9 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC36.38■■■■□ 3.41
Gm35339A0A140LHH9 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC36.38■■■■□ 3.41
Gm35339A0A140LHH9 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC36.38■■■■□ 3.41
Gm35339A0A140LHH9 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC36.37■■■■□ 3.41
Gm35339A0A140LHH9 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC36.37■■■■□ 3.41
Gm35339A0A140LHH9 Gm5364-201ENSMUST00000216789 889 ntBASIC36.37■■■■□ 3.41
Gm35339A0A140LHH9 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC36.37■■■■□ 3.41
Gm35339A0A140LHH9 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC36.37■■■■□ 3.41
Gm35339A0A140LHH9 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC36.37■■■■□ 3.41
Gm35339A0A140LHH9 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC36.37■■■■□ 3.41
Gm35339A0A140LHH9 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC36.36■■■■□ 3.41
Gm35339A0A140LHH9 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC36.36■■■■□ 3.41
Gm35339A0A140LHH9 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC36.36■■■■□ 3.41
Gm35339A0A140LHH9 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC36.36■■■■□ 3.41
Gm35339A0A140LHH9 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC36.36■■■■□ 3.41
Gm35339A0A140LHH9 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC36.36■■■■□ 3.41
Gm35339A0A140LHH9 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC36.36■■■■□ 3.41
Gm35339A0A140LHH9 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC36.36■■■■□ 3.41
Gm35339A0A140LHH9 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC36.36■■■■□ 3.41
Gm35339A0A140LHH9 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC36.35■■■■□ 3.41
Gm35339A0A140LHH9 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC36.35■■■■□ 3.41
Gm35339A0A140LHH9 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC36.34■■■■□ 3.41
Gm35339A0A140LHH9 Gm29707-201ENSMUST00000196325 491 ntBASIC36.34■■■■□ 3.41
Gm35339A0A140LHH9 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC36.34■■■■□ 3.41
Gm35339A0A140LHH9 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC36.34■■■■□ 3.41
Gm35339A0A140LHH9 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC36.34■■■■□ 3.41
Gm35339A0A140LHH9 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC36.34■■■■□ 3.41
Gm35339A0A140LHH9 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC36.34■■■■□ 3.41
Gm35339A0A140LHH9 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC36.34■■■■□ 3.41
Gm35339A0A140LHH9 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC36.34■■■■□ 3.41
Gm35339A0A140LHH9 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC36.34■■■■□ 3.41
Gm35339A0A140LHH9 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC36.34■■■■□ 3.41
Gm35339A0A140LHH9 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC36.33■■■■□ 3.41
Gm35339A0A140LHH9 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC36.33■■■■□ 3.41
Gm35339A0A140LHH9 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC36.32■■■■□ 3.41
Gm35339A0A140LHH9 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC36.32■■■■□ 3.4
Gm35339A0A140LHH9 Gm42670-201ENSMUST00000201816 1292 ntBASIC36.32■■■■□ 3.4
Gm35339A0A140LHH9 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC36.32■■■■□ 3.4
Gm35339A0A140LHH9 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC36.32■■■■□ 3.4
Gm35339A0A140LHH9 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC36.32■■■■□ 3.4
Gm35339A0A140LHH9 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC36.32■■■■□ 3.4
Gm35339A0A140LHH9 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC36.32■■■■□ 3.4
Gm35339A0A140LHH9 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC36.31■■■■□ 3.4
Gm35339A0A140LHH9 Gm45141-201ENSMUST00000206502 1888 ntBASIC36.31■■■■□ 3.4
Gm35339A0A140LHH9 Gm25990-201ENSMUST00000102440 86 ntBASIC36.31■■■■□ 3.4
Gm35339A0A140LHH9 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC36.31■■■■□ 3.4
Gm35339A0A140LHH9 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC36.31■■■■□ 3.4
Gm35339A0A140LHH9 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC36.31■■■■□ 3.4
Gm35339A0A140LHH9 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC36.31■■■■□ 3.4
Gm35339A0A140LHH9 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC36.31■■■■□ 3.4
Gm35339A0A140LHH9 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC36.3■■■■□ 3.4
Gm35339A0A140LHH9 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC36.3■■■■□ 3.4
Gm35339A0A140LHH9 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC36.3■■■■□ 3.4
Gm35339A0A140LHH9 Gm7230-201ENSMUST00000173026 815 ntBASIC36.3■■■■□ 3.4
Gm35339A0A140LHH9 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC36.3■■■■□ 3.4
Gm35339A0A140LHH9 AC154621.1-201ENSMUST00000226155 1119 ntBASIC36.3■■■■□ 3.4
Gm35339A0A140LHH9 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC36.3■■■■□ 3.4
Gm35339A0A140LHH9 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC36.3■■■■□ 3.4
Gm35339A0A140LHH9 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC36.3■■■■□ 3.4
Gm35339A0A140LHH9 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC36.3■■■■□ 3.4
Gm35339A0A140LHH9 Gm6376-201ENSMUST00000209407 580 ntBASIC36.3■■■■□ 3.4
Gm35339A0A140LHH9 AC160338.1-201ENSMUST00000214232 705 ntBASIC36.3■■■■□ 3.4
Gm35339A0A140LHH9 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC36.3■■■■□ 3.4
Gm35339A0A140LHH9 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC36.29■■■■□ 3.4
Gm35339A0A140LHH9 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC36.29■■■■□ 3.4
Gm35339A0A140LHH9 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC36.29■■■■□ 3.4
Gm35339A0A140LHH9 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC36.29■■■■□ 3.4
Gm35339A0A140LHH9 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC36.29■■■■□ 3.4
Gm35339A0A140LHH9 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC36.29■■■■□ 3.4
Gm35339A0A140LHH9 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC36.29■■■■□ 3.4
Gm35339A0A140LHH9 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC36.29■■■■□ 3.4
Gm35339A0A140LHH9 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC36.28■■■■□ 3.4
Gm35339A0A140LHH9 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC36.28■■■■□ 3.4
Gm35339A0A140LHH9 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC36.28■■■■□ 3.4
Gm35339A0A140LHH9 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC36.28■■■■□ 3.4
Gm35339A0A140LHH9 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC36.28■■■■□ 3.4
Gm35339A0A140LHH9 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC36.28■■■■□ 3.4
Gm35339A0A140LHH9 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC36.28■■■■□ 3.4
Gm35339A0A140LHH9 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC36.28■■■■□ 3.4
Gm35339A0A140LHH9 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC36.28■■■■□ 3.4
Gm35339A0A140LHH9 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC36.28■■■■□ 3.4
Gm35339A0A140LHH9 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC36.27■■■■□ 3.4
Gm35339A0A140LHH9 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC36.27■■■■□ 3.4
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms