Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav9d-4A0A0G2JG37 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav9d-4A0A0G2JG37 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav9d-4A0A0G2JG37 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav9d-4A0A0G2JG37 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav9d-4A0A0G2JG37 Gm45774-201ENSMUST00000211992 2665 ntBASIC11.92□□□□□ -0.5
Trav9d-4A0A0G2JG37 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav9d-4A0A0G2JG37 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav9d-4A0A0G2JG37 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Trav9d-4A0A0G2JG37 Gm38345-201ENSMUST00000192635 1748 ntBASIC11.91□□□□□ -0.5
Trav9d-4A0A0G2JG37 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav9d-4A0A0G2JG37 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav9d-4A0A0G2JG37 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav9d-4A0A0G2JG37 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav9d-4A0A0G2JG37 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav9d-4A0A0G2JG37 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC11.91□□□□□ -0.5
Trav9d-4A0A0G2JG37 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav9d-4A0A0G2JG37 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav9d-4A0A0G2JG37 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav9d-4A0A0G2JG37 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav9d-4A0A0G2JG37 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Trav9d-4A0A0G2JG37 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav9d-4A0A0G2JG37 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav9d-4A0A0G2JG37 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav9d-4A0A0G2JG37 Cxcl14-202ENSMUST00000224801 1467 ntBASIC11.91□□□□□ -0.5
Trav9d-4A0A0G2JG37 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav9d-4A0A0G2JG37 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav9d-4A0A0G2JG37 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC11.91□□□□□ -0.5
Trav9d-4A0A0G2JG37 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC11.91□□□□□ -0.5
Trav9d-4A0A0G2JG37 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav9d-4A0A0G2JG37 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav9d-4A0A0G2JG37 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC11.91□□□□□ -0.5
Trav9d-4A0A0G2JG37 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Trav9d-4A0A0G2JG37 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav9d-4A0A0G2JG37 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav9d-4A0A0G2JG37 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC11.91□□□□□ -0.5
Trav9d-4A0A0G2JG37 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav9d-4A0A0G2JG37 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav9d-4A0A0G2JG37 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav9d-4A0A0G2JG37 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav9d-4A0A0G2JG37 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9d-4A0A0G2JG37 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9d-4A0A0G2JG37 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9d-4A0A0G2JG37 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9d-4A0A0G2JG37 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9d-4A0A0G2JG37 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9d-4A0A0G2JG37 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9d-4A0A0G2JG37 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9d-4A0A0G2JG37 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9d-4A0A0G2JG37 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9d-4A0A0G2JG37 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9d-4A0A0G2JG37 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC11.9□□□□□ -0.5
Trav9d-4A0A0G2JG37 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9d-4A0A0G2JG37 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC11.9□□□□□ -0.5
Trav9d-4A0A0G2JG37 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Trav9d-4A0A0G2JG37 Gm40848-201ENSMUST00000221998 324 ntBASIC11.9□□□□□ -0.5
Trav9d-4A0A0G2JG37 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9d-4A0A0G2JG37 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav9d-4A0A0G2JG37 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Trav9d-4A0A0G2JG37 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Trav9d-4A0A0G2JG37 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Trav9d-4A0A0G2JG37 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav9d-4A0A0G2JG37 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav9d-4A0A0G2JG37 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9d-4A0A0G2JG37 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9d-4A0A0G2JG37 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Trav9d-4A0A0G2JG37 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9d-4A0A0G2JG37 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9d-4A0A0G2JG37 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9d-4A0A0G2JG37 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9d-4A0A0G2JG37 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav9d-4A0A0G2JG37 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9d-4A0A0G2JG37 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9d-4A0A0G2JG37 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC11.89□□□□□ -0.51
Trav9d-4A0A0G2JG37 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
Trav9d-4A0A0G2JG37 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC11.89□□□□□ -0.51
Trav9d-4A0A0G2JG37 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC11.89□□□□□ -0.51
Trav9d-4A0A0G2JG37 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9d-4A0A0G2JG37 AC160393.1-201ENSMUST00000218378 1279 ntBASIC11.89□□□□□ -0.51
Trav9d-4A0A0G2JG37 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9d-4A0A0G2JG37 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9d-4A0A0G2JG37 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9d-4A0A0G2JG37 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Trav9d-4A0A0G2JG37 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav9d-4A0A0G2JG37 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9d-4A0A0G2JG37 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9d-4A0A0G2JG37 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav9d-4A0A0G2JG37 Idnk-204ENSMUST00000226010 1898 ntBASIC11.89□□□□□ -0.51
Trav9d-4A0A0G2JG37 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9d-4A0A0G2JG37 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav9d-4A0A0G2JG37 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav9d-4A0A0G2JG37 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9d-4A0A0G2JG37 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9d-4A0A0G2JG37 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9d-4A0A0G2JG37 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9d-4A0A0G2JG37 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9d-4A0A0G2JG37 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9d-4A0A0G2JG37 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav9d-4A0A0G2JG37 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav9d-4A0A0G2JG37 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms