Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trav13n-4A0A0G2JG01 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13n-4A0A0G2JG01 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13n-4A0A0G2JG01 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13n-4A0A0G2JG01 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.06□□□□□ -0.16
Trav13n-4A0A0G2JG01 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13n-4A0A0G2JG01 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Trav13n-4A0A0G2JG01 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13n-4A0A0G2JG01 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trav13n-4A0A0G2JG01 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav13n-4A0A0G2JG01 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav13n-4A0A0G2JG01 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav13n-4A0A0G2JG01 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC14.05□□□□□ -0.16
Trav13n-4A0A0G2JG01 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav13n-4A0A0G2JG01 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav13n-4A0A0G2JG01 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav13n-4A0A0G2JG01 Gm15565-201ENSMUST00000118890 427 ntBASIC14.05□□□□□ -0.16
Trav13n-4A0A0G2JG01 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav13n-4A0A0G2JG01 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC14.05□□□□□ -0.16
Trav13n-4A0A0G2JG01 AC140264.2-202ENSMUST00000218746 817 ntBASIC14.05□□□□□ -0.16
Trav13n-4A0A0G2JG01 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav13n-4A0A0G2JG01 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trav13n-4A0A0G2JG01 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav13n-4A0A0G2JG01 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC14.05□□□□□ -0.16
Trav13n-4A0A0G2JG01 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC14.05□□□□□ -0.16
Trav13n-4A0A0G2JG01 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trav13n-4A0A0G2JG01 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav13n-4A0A0G2JG01 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav13n-4A0A0G2JG01 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav13n-4A0A0G2JG01 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13n-4A0A0G2JG01 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13n-4A0A0G2JG01 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13n-4A0A0G2JG01 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trav13n-4A0A0G2JG01 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13n-4A0A0G2JG01 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13n-4A0A0G2JG01 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trav13n-4A0A0G2JG01 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13n-4A0A0G2JG01 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13n-4A0A0G2JG01 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13n-4A0A0G2JG01 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.04□□□□□ -0.16
Trav13n-4A0A0G2JG01 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13n-4A0A0G2JG01 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13n-4A0A0G2JG01 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC14.04□□□□□ -0.16
Trav13n-4A0A0G2JG01 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13n-4A0A0G2JG01 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC14.04□□□□□ -0.16
Trav13n-4A0A0G2JG01 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13n-4A0A0G2JG01 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC14.04□□□□□ -0.16
Trav13n-4A0A0G2JG01 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13n-4A0A0G2JG01 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13n-4A0A0G2JG01 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trav13n-4A0A0G2JG01 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13n-4A0A0G2JG01 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13n-4A0A0G2JG01 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC14.04□□□□□ -0.16
Trav13n-4A0A0G2JG01 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Trav13n-4A0A0G2JG01 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13n-4A0A0G2JG01 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13n-4A0A0G2JG01 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13n-4A0A0G2JG01 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13n-4A0A0G2JG01 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13n-4A0A0G2JG01 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13n-4A0A0G2JG01 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13n-4A0A0G2JG01 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13n-4A0A0G2JG01 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13n-4A0A0G2JG01 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.03□□□□□ -0.16
Trav13n-4A0A0G2JG01 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Trav13n-4A0A0G2JG01 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav13n-4A0A0G2JG01 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trav13n-4A0A0G2JG01 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13n-4A0A0G2JG01 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13n-4A0A0G2JG01 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13n-4A0A0G2JG01 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13n-4A0A0G2JG01 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13n-4A0A0G2JG01 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13n-4A0A0G2JG01 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Trav13n-4A0A0G2JG01 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13n-4A0A0G2JG01 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.03□□□□□ -0.16
Trav13n-4A0A0G2JG01 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13n-4A0A0G2JG01 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav13n-4A0A0G2JG01 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav13n-4A0A0G2JG01 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav13n-4A0A0G2JG01 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav13n-4A0A0G2JG01 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav13n-4A0A0G2JG01 CT010444.2-201ENSMUST00000217877 1629 ntBASIC14.02□□□□□ -0.16
Trav13n-4A0A0G2JG01 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav13n-4A0A0G2JG01 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav13n-4A0A0G2JG01 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Trav13n-4A0A0G2JG01 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Trav13n-4A0A0G2JG01 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Trav13n-4A0A0G2JG01 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Trav13n-4A0A0G2JG01 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Trav13n-4A0A0G2JG01 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC14.02□□□□□ -0.17
Trav13n-4A0A0G2JG01 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Trav13n-4A0A0G2JG01 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav13n-4A0A0G2JG01 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Trav13n-4A0A0G2JG01 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Trav13n-4A0A0G2JG01 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Trav13n-4A0A0G2JG01 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC14.02□□□□□ -0.17
Trav13n-4A0A0G2JG01 AC130671.1-201ENSMUST00000227384 1237 ntBASIC14.02□□□□□ -0.17
Trav13n-4A0A0G2JG01 AC163280.1-201ENSMUST00000228194 1100 ntBASIC14.02□□□□□ -0.17
Trav13n-4A0A0G2JG01 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms