Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9-4A0A0B4J1K2 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9-4A0A0B4J1K2 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Trav9-4A0A0B4J1K2 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9-4A0A0B4J1K2 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9-4A0A0B4J1K2 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC13.01□□□□□ -0.33
Trav9-4A0A0B4J1K2 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9-4A0A0B4J1K2 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC13.01□□□□□ -0.33
Trav9-4A0A0B4J1K2 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9-4A0A0B4J1K2 Gm4974-201ENSMUST00000209974 875 ntBASIC13.01□□□□□ -0.33
Trav9-4A0A0B4J1K2 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC13.01□□□□□ -0.33
Trav9-4A0A0B4J1K2 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9-4A0A0B4J1K2 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Trav9-4A0A0B4J1K2 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9-4A0A0B4J1K2 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9-4A0A0B4J1K2 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9-4A0A0B4J1K2 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trav9-4A0A0B4J1K2 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9-4A0A0B4J1K2 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9-4A0A0B4J1K2 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav9-4A0A0B4J1K2 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9-4A0A0B4J1K2 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9-4A0A0B4J1K2 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9-4A0A0B4J1K2 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trav9-4A0A0B4J1K2 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9-4A0A0B4J1K2 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9-4A0A0B4J1K2 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav9-4A0A0B4J1K2 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav9-4A0A0B4J1K2 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav9-4A0A0B4J1K2 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav9-4A0A0B4J1K2 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav9-4A0A0B4J1K2 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trav9-4A0A0B4J1K2 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav9-4A0A0B4J1K2 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9-4A0A0B4J1K2 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC13□□□□□ -0.33
Trav9-4A0A0B4J1K2 Gm13181-201ENSMUST00000120117 1069 ntBASIC13□□□□□ -0.33
Trav9-4A0A0B4J1K2 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9-4A0A0B4J1K2 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC13□□□□□ -0.33
Trav9-4A0A0B4J1K2 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav9-4A0A0B4J1K2 Mir8112-201ENSMUST00000184382 131 ntBASIC13□□□□□ -0.33
Trav9-4A0A0B4J1K2 Gm9694-201ENSMUST00000193347 1189 ntBASIC13□□□□□ -0.33
Trav9-4A0A0B4J1K2 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9-4A0A0B4J1K2 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9-4A0A0B4J1K2 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9-4A0A0B4J1K2 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav9-4A0A0B4J1K2 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9-4A0A0B4J1K2 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9-4A0A0B4J1K2 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC13□□□□□ -0.33
Trav9-4A0A0B4J1K2 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trav9-4A0A0B4J1K2 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9-4A0A0B4J1K2 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9-4A0A0B4J1K2 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav9-4A0A0B4J1K2 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav9-4A0A0B4J1K2 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9-4A0A0B4J1K2 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9-4A0A0B4J1K2 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9-4A0A0B4J1K2 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9-4A0A0B4J1K2 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9-4A0A0B4J1K2 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9-4A0A0B4J1K2 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9-4A0A0B4J1K2 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9-4A0A0B4J1K2 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC12.99□□□□□ -0.33
Trav9-4A0A0B4J1K2 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC12.99□□□□□ -0.33
Trav9-4A0A0B4J1K2 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9-4A0A0B4J1K2 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC12.99□□□□□ -0.33
Trav9-4A0A0B4J1K2 AC175538.1-201ENSMUST00000225343 1269 ntBASIC12.99□□□□□ -0.33
Trav9-4A0A0B4J1K2 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9-4A0A0B4J1K2 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trav9-4A0A0B4J1K2 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Trav9-4A0A0B4J1K2 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9-4A0A0B4J1K2 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trav9-4A0A0B4J1K2 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trav9-4A0A0B4J1K2 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trav9-4A0A0B4J1K2 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9-4A0A0B4J1K2 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav9-4A0A0B4J1K2 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9-4A0A0B4J1K2 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9-4A0A0B4J1K2 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9-4A0A0B4J1K2 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC12.98□□□□□ -0.33
Trav9-4A0A0B4J1K2 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9-4A0A0B4J1K2 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9-4A0A0B4J1K2 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav9-4A0A0B4J1K2 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9-4A0A0B4J1K2 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9-4A0A0B4J1K2 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9-4A0A0B4J1K2 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9-4A0A0B4J1K2 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9-4A0A0B4J1K2 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9-4A0A0B4J1K2 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9-4A0A0B4J1K2 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC12.98□□□□□ -0.33
Trav9-4A0A0B4J1K2 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9-4A0A0B4J1K2 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9-4A0A0B4J1K2 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trav9-4A0A0B4J1K2 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9-4A0A0B4J1K2 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9-4A0A0B4J1K2 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav9-4A0A0B4J1K2 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9-4A0A0B4J1K2 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9-4A0A0B4J1K2 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav9-4A0A0B4J1K2 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms