Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.67■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.67■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Gm18958-201ENSMUST00000174258 762 ntBASIC17.67■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.67■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.67■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Igkv5-43A0A0B4J1J2 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.67■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Actl10-202ENSMUST00000226583 1501 ntBASIC17.67■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.66■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Gm21559-201ENSMUST00000220638 855 ntBASIC17.66■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Gm8587-201ENSMUST00000076538 843 ntBASIC17.66■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.66■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Igkv5-43A0A0B4J1J2 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.66■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.65■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Gm23634-201ENSMUST00000175071 91 ntBASIC17.65■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Igkv5-43A0A0B4J1J2 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Igkv5-43A0A0B4J1J2 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
Igkv5-43A0A0B4J1J2 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.64■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.64■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.63■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Igkv5-43A0A0B4J1J2 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Igkv5-43A0A0B4J1J2 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Igkv5-43A0A0B4J1J2 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.62■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
Igkv5-43A0A0B4J1J2 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Igkv5-43A0A0B4J1J2 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms