Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC15.28■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trbv12-1A0A0B4J1H0 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC15.28■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Gm7791-201ENSMUST00000219066 539 ntBASIC15.28■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Gm5417-201ENSMUST00000079706 384 ntBASIC15.28■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Gm5898-201ENSMUST00000121016 2071 ntBASIC15.28■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv12-1A0A0B4J1H0 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC15.27■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv12-1A0A0B4J1H0 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC15.27■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Gm10252-201ENSMUST00000209541 832 ntBASIC15.27■□□□□ 0.04
Trbv12-1A0A0B4J1H0 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.27■□□□□ 0.03
Trbv12-1A0A0B4J1H0 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv12-1A0A0B4J1H0 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv12-1A0A0B4J1H0 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv12-1A0A0B4J1H0 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv12-1A0A0B4J1H0 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv12-1A0A0B4J1H0 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv12-1A0A0B4J1H0 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv12-1A0A0B4J1H0 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC15.26■□□□□ 0.03
Trbv12-1A0A0B4J1H0 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv12-1A0A0B4J1H0 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv12-1A0A0B4J1H0 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv12-1A0A0B4J1H0 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC15.26■□□□□ 0.03
Trbv12-1A0A0B4J1H0 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv12-1A0A0B4J1H0 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC15.26■□□□□ 0.03
Trbv12-1A0A0B4J1H0 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trbv12-1A0A0B4J1H0 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
Trbv12-1A0A0B4J1H0 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv12-1A0A0B4J1H0 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv12-1A0A0B4J1H0 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC15.25■□□□□ 0.03
Trbv12-1A0A0B4J1H0 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trbv12-1A0A0B4J1H0 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv12-1A0A0B4J1H0 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv12-1A0A0B4J1H0 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv12-1A0A0B4J1H0 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv12-1A0A0B4J1H0 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv12-1A0A0B4J1H0 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv12-1A0A0B4J1H0 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv12-1A0A0B4J1H0 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv12-1A0A0B4J1H0 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC15.25■□□□□ 0.03
Trbv12-1A0A0B4J1H0 Gm43353-201ENSMUST00000199224 1295 ntBASIC15.25■□□□□ 0.03
Trbv12-1A0A0B4J1H0 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv12-1A0A0B4J1H0 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC15.25■□□□□ 0.03
Trbv12-1A0A0B4J1H0 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv12-1A0A0B4J1H0 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Trbv12-1A0A0B4J1H0 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv12-1A0A0B4J1H0 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.25■□□□□ 0.03
Trbv12-1A0A0B4J1H0 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv12-1A0A0B4J1H0 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv12-1A0A0B4J1H0 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv12-1A0A0B4J1H0 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv12-1A0A0B4J1H0 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv12-1A0A0B4J1H0 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Trbv12-1A0A0B4J1H0 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv12-1A0A0B4J1H0 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv12-1A0A0B4J1H0 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv12-1A0A0B4J1H0 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Trbv12-1A0A0B4J1H0 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv12-1A0A0B4J1H0 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Trbv12-1A0A0B4J1H0 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv12-1A0A0B4J1H0 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv12-1A0A0B4J1H0 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv12-1A0A0B4J1H0 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC15.24■□□□□ 0.03
Trbv12-1A0A0B4J1H0 Gm30025-201ENSMUST00000218555 728 ntBASIC15.24■□□□□ 0.03
Trbv12-1A0A0B4J1H0 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv12-1A0A0B4J1H0 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv12-1A0A0B4J1H0 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv12-1A0A0B4J1H0 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv12-1A0A0B4J1H0 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv12-1A0A0B4J1H0 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv12-1A0A0B4J1H0 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv12-1A0A0B4J1H0 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv12-1A0A0B4J1H0 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv12-1A0A0B4J1H0 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv12-1A0A0B4J1H0 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms