Protein–RNA interactions for Protein: A0A0A6YY83

Pcdh7, Protocadherin 7, mousemouse

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh7A0A0A6YY83 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.83■□□□□ 0.44
Pcdh7A0A0A6YY83 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdh7A0A0A6YY83 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.83■□□□□ 0.44
Pcdh7A0A0A6YY83 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdh7A0A0A6YY83 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdh7A0A0A6YY83 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.83■□□□□ 0.44
Pcdh7A0A0A6YY83 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdh7A0A0A6YY83 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdh7A0A0A6YY83 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Pcdh7A0A0A6YY83 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.83■□□□□ 0.44
Pcdh7A0A0A6YY83 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh7A0A0A6YY83 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh7A0A0A6YY83 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh7A0A0A6YY83 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh7A0A0A6YY83 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh7A0A0A6YY83 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh7A0A0A6YY83 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh7A0A0A6YY83 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh7A0A0A6YY83 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh7A0A0A6YY83 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.82■□□□□ 0.44
Pcdh7A0A0A6YY83 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh7A0A0A6YY83 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh7A0A0A6YY83 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.82■□□□□ 0.44
Pcdh7A0A0A6YY83 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.82■□□□□ 0.44
Pcdh7A0A0A6YY83 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Pcdh7A0A0A6YY83 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh7A0A0A6YY83 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh7A0A0A6YY83 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh7A0A0A6YY83 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh7A0A0A6YY83 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh7A0A0A6YY83 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh7A0A0A6YY83 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdh7A0A0A6YY83 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh7A0A0A6YY83 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh7A0A0A6YY83 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.81■□□□□ 0.44
Pcdh7A0A0A6YY83 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Pcdh7A0A0A6YY83 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh7A0A0A6YY83 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh7A0A0A6YY83 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh7A0A0A6YY83 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh7A0A0A6YY83 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh7A0A0A6YY83 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.81■□□□□ 0.44
Pcdh7A0A0A6YY83 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh7A0A0A6YY83 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh7A0A0A6YY83 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh7A0A0A6YY83 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh7A0A0A6YY83 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.81■□□□□ 0.44
Pcdh7A0A0A6YY83 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.81■□□□□ 0.44
Pcdh7A0A0A6YY83 Gm9731-201ENSMUST00000209480 747 ntBASIC17.81■□□□□ 0.44
Pcdh7A0A0A6YY83 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh7A0A0A6YY83 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh7A0A0A6YY83 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh7A0A0A6YY83 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh7A0A0A6YY83 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh7A0A0A6YY83 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh7A0A0A6YY83 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh7A0A0A6YY83 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh7A0A0A6YY83 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdh7A0A0A6YY83 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Pcdh7A0A0A6YY83 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh7A0A0A6YY83 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Pcdh7A0A0A6YY83 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh7A0A0A6YY83 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.8■□□□□ 0.44
Pcdh7A0A0A6YY83 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
Pcdh7A0A0A6YY83 Gm21814-202ENSMUST00000203277 873 ntBASIC17.8■□□□□ 0.44
Pcdh7A0A0A6YY83 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh7A0A0A6YY83 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh7A0A0A6YY83 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh7A0A0A6YY83 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh7A0A0A6YY83 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Pcdh7A0A0A6YY83 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh7A0A0A6YY83 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdh7A0A0A6YY83 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh7A0A0A6YY83 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Pcdh7A0A0A6YY83 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh7A0A0A6YY83 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh7A0A0A6YY83 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh7A0A0A6YY83 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.79■□□□□ 0.44
Pcdh7A0A0A6YY83 Mir5122-201ENSMUST00000175004 89 ntBASIC17.79■□□□□ 0.44
Pcdh7A0A0A6YY83 Gm3375-201ENSMUST00000203929 796 ntBASIC17.79■□□□□ 0.44
Pcdh7A0A0A6YY83 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.79■□□□□ 0.44
Pcdh7A0A0A6YY83 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Pcdh7A0A0A6YY83 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh7A0A0A6YY83 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Pcdh7A0A0A6YY83 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh7A0A0A6YY83 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh7A0A0A6YY83 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh7A0A0A6YY83 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh7A0A0A6YY83 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh7A0A0A6YY83 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh7A0A0A6YY83 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdh7A0A0A6YY83 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.79■□□□□ 0.44
Pcdh7A0A0A6YY83 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
Pcdh7A0A0A6YY83 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh7A0A0A6YY83 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh7A0A0A6YY83 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
Pcdh7A0A0A6YY83 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh7A0A0A6YY83 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh7A0A0A6YY83 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Pcdh7A0A0A6YY83 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 380.8 ms