Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav21-dv12A0A075B6C4 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC13.34□□□□□ -0.27
Trav21-dv12A0A075B6C4 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC13.34□□□□□ -0.27
Trav21-dv12A0A075B6C4 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav21-dv12A0A075B6C4 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav21-dv12A0A075B6C4 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav21-dv12A0A075B6C4 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav21-dv12A0A075B6C4 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav21-dv12A0A075B6C4 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav21-dv12A0A075B6C4 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav21-dv12A0A075B6C4 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav21-dv12A0A075B6C4 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC13.34□□□□□ -0.27
Trav21-dv12A0A075B6C4 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav21-dv12A0A075B6C4 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav21-dv12A0A075B6C4 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav21-dv12A0A075B6C4 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC13.33□□□□□ -0.27
Trav21-dv12A0A075B6C4 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav21-dv12A0A075B6C4 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Trav21-dv12A0A075B6C4 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
Trav21-dv12A0A075B6C4 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.27
Trav21-dv12A0A075B6C4 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav21-dv12A0A075B6C4 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav21-dv12A0A075B6C4 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav21-dv12A0A075B6C4 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav21-dv12A0A075B6C4 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav21-dv12A0A075B6C4 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav21-dv12A0A075B6C4 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav21-dv12A0A075B6C4 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trav21-dv12A0A075B6C4 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav21-dv12A0A075B6C4 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC13.33□□□□□ -0.28
Trav21-dv12A0A075B6C4 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC13.33□□□□□ -0.28
Trav21-dv12A0A075B6C4 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav21-dv12A0A075B6C4 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav21-dv12A0A075B6C4 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC13.33□□□□□ -0.28
Trav21-dv12A0A075B6C4 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC13.33□□□□□ -0.28
Trav21-dv12A0A075B6C4 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Trav21-dv12A0A075B6C4 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav21-dv12A0A075B6C4 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav21-dv12A0A075B6C4 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trav21-dv12A0A075B6C4 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav21-dv12A0A075B6C4 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav21-dv12A0A075B6C4 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC13.33□□□□□ -0.28
Trav21-dv12A0A075B6C4 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav21-dv12A0A075B6C4 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav21-dv12A0A075B6C4 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trav21-dv12A0A075B6C4 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav21-dv12A0A075B6C4 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav21-dv12A0A075B6C4 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav21-dv12A0A075B6C4 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav21-dv12A0A075B6C4 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav21-dv12A0A075B6C4 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav21-dv12A0A075B6C4 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav21-dv12A0A075B6C4 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Trav21-dv12A0A075B6C4 Gm6598-201ENSMUST00000202719 2615 ntBASIC13.32□□□□□ -0.28
Trav21-dv12A0A075B6C4 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav21-dv12A0A075B6C4 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav21-dv12A0A075B6C4 Gm37519-201ENSMUST00000191687 2210 ntBASIC13.32□□□□□ -0.28
Trav21-dv12A0A075B6C4 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trav21-dv12A0A075B6C4 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav21-dv12A0A075B6C4 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trav21-dv12A0A075B6C4 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav21-dv12A0A075B6C4 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav21-dv12A0A075B6C4 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC13.32□□□□□ -0.28
Trav21-dv12A0A075B6C4 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav21-dv12A0A075B6C4 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav21-dv12A0A075B6C4 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trav21-dv12A0A075B6C4 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav21-dv12A0A075B6C4 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC13.32□□□□□ -0.28
Trav21-dv12A0A075B6C4 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Trav21-dv12A0A075B6C4 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav21-dv12A0A075B6C4 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav21-dv12A0A075B6C4 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav21-dv12A0A075B6C4 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav21-dv12A0A075B6C4 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav21-dv12A0A075B6C4 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trav21-dv12A0A075B6C4 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav21-dv12A0A075B6C4 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav21-dv12A0A075B6C4 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trav21-dv12A0A075B6C4 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav21-dv12A0A075B6C4 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav21-dv12A0A075B6C4 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav21-dv12A0A075B6C4 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav21-dv12A0A075B6C4 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav21-dv12A0A075B6C4 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav21-dv12A0A075B6C4 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav21-dv12A0A075B6C4 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav21-dv12A0A075B6C4 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav21-dv12A0A075B6C4 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav21-dv12A0A075B6C4 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav21-dv12A0A075B6C4 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav21-dv12A0A075B6C4 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav21-dv12A0A075B6C4 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav21-dv12A0A075B6C4 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav21-dv12A0A075B6C4 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav21-dv12A0A075B6C4 Gm19439-201ENSMUST00000198195 2273 ntBASIC13.31□□□□□ -0.28
Trav21-dv12A0A075B6C4 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav21-dv12A0A075B6C4 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav21-dv12A0A075B6C4 Mir2861-201ENSMUST00000175539 82 ntBASIC13.31□□□□□ -0.28
Trav21-dv12A0A075B6C4 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav21-dv12A0A075B6C4 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms