Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC11.96□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC11.96□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13-4-dv7A0A075B6C2 Ddx41-204ENSMUST00000224765 2199 ntBASIC11.96□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Zkscan3-208ENSMUST00000224820 5398 ntBASIC11.96□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC11.96□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC11.95□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Gm7514-201ENSMUST00000209475 934 ntBASIC11.95□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC11.95□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 AC099934.2-201ENSMUST00000196389 70 ntBASIC11.94□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 AC156953.1-201ENSMUST00000196953 70 ntBASIC11.94□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 AC157822.2-201ENSMUST00000200291 70 ntBASIC11.94□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC11.94□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Trav13-4-dv7A0A075B6C2 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms