Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6n-6A0A075B6B2 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav6n-6A0A075B6B2 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6n-6A0A075B6B2 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6n-6A0A075B6B2 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6n-6A0A075B6B2 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6n-6A0A075B6B2 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6n-6A0A075B6B2 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6n-6A0A075B6B2 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trav6n-6A0A075B6B2 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trav6n-6A0A075B6B2 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6n-6A0A075B6B2 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6n-6A0A075B6B2 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC12.92□□□□□ -0.34
Trav6n-6A0A075B6B2 Gm19094-201ENSMUST00000209791 1246 ntBASIC12.92□□□□□ -0.34
Trav6n-6A0A075B6B2 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav6n-6A0A075B6B2 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
Trav6n-6A0A075B6B2 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6n-6A0A075B6B2 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Trav6n-6A0A075B6B2 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trav6n-6A0A075B6B2 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
Trav6n-6A0A075B6B2 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6n-6A0A075B6B2 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6n-6A0A075B6B2 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6n-6A0A075B6B2 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav6n-6A0A075B6B2 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6n-6A0A075B6B2 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6n-6A0A075B6B2 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC12.92□□□□□ -0.34
Trav6n-6A0A075B6B2 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trav6n-6A0A075B6B2 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6n-6A0A075B6B2 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6n-6A0A075B6B2 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6n-6A0A075B6B2 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6n-6A0A075B6B2 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6n-6A0A075B6B2 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6n-6A0A075B6B2 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav6n-6A0A075B6B2 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6n-6A0A075B6B2 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6n-6A0A075B6B2 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6n-6A0A075B6B2 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trav6n-6A0A075B6B2 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6n-6A0A075B6B2 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6n-6A0A075B6B2 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6n-6A0A075B6B2 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Trav6n-6A0A075B6B2 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6n-6A0A075B6B2 Gm12933-201ENSMUST00000120203 872 ntBASIC12.91□□□□□ -0.34
Trav6n-6A0A075B6B2 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC12.91□□□□□ -0.34
Trav6n-6A0A075B6B2 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC12.91□□□□□ -0.34
Trav6n-6A0A075B6B2 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6n-6A0A075B6B2 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC12.91□□□□□ -0.34
Trav6n-6A0A075B6B2 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6n-6A0A075B6B2 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6n-6A0A075B6B2 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6n-6A0A075B6B2 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6n-6A0A075B6B2 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav6n-6A0A075B6B2 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6n-6A0A075B6B2 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6n-6A0A075B6B2 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trav6n-6A0A075B6B2 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6n-6A0A075B6B2 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6n-6A0A075B6B2 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6n-6A0A075B6B2 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6n-6A0A075B6B2 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav6n-6A0A075B6B2 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav6n-6A0A075B6B2 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Trav6n-6A0A075B6B2 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6n-6A0A075B6B2 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC12.9□□□□□ -0.34
Trav6n-6A0A075B6B2 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6n-6A0A075B6B2 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC12.9□□□□□ -0.34
Trav6n-6A0A075B6B2 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6n-6A0A075B6B2 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Trav6n-6A0A075B6B2 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6n-6A0A075B6B2 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6n-6A0A075B6B2 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6n-6A0A075B6B2 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6n-6A0A075B6B2 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6n-6A0A075B6B2 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6n-6A0A075B6B2 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6n-6A0A075B6B2 Nespas-201ENSMUST00000143738 1083 ntBASIC12.9□□□□□ -0.34
Trav6n-6A0A075B6B2 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC12.9□□□□□ -0.34
Trav6n-6A0A075B6B2 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6n-6A0A075B6B2 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC12.9□□□□□ -0.34
Trav6n-6A0A075B6B2 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6n-6A0A075B6B2 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6n-6A0A075B6B2 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6n-6A0A075B6B2 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6n-6A0A075B6B2 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6n-6A0A075B6B2 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6n-6A0A075B6B2 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6n-6A0A075B6B2 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trav6n-6A0A075B6B2 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Trav6n-6A0A075B6B2 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Trav6n-6A0A075B6B2 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6n-6A0A075B6B2 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Trav6n-6A0A075B6B2 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6n-6A0A075B6B2 Gm14026-201ENSMUST00000120625 1789 ntBASIC12.89□□□□□ -0.35
Trav6n-6A0A075B6B2 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6n-6A0A075B6B2 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6n-6A0A075B6B2 AC131586.2-201ENSMUST00000228370 1512 ntBASIC12.89□□□□□ -0.35
Trav6n-6A0A075B6B2 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav6n-6A0A075B6B2 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms