Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav16A0A075B653 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav16A0A075B653 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav16A0A075B653 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav16A0A075B653 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC13.42□□□□□ -0.26
Trav16A0A075B653 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav16A0A075B653 Gm27454-201ENSMUST00000185090 204 ntBASIC13.42□□□□□ -0.26
Trav16A0A075B653 Appbp2os-202ENSMUST00000206972 447 ntBASIC13.42□□□□□ -0.26
Trav16A0A075B653 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Trav16A0A075B653 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav16A0A075B653 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav16A0A075B653 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav16A0A075B653 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav16A0A075B653 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav16A0A075B653 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav16A0A075B653 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav16A0A075B653 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trav16A0A075B653 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav16A0A075B653 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav16A0A075B653 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC13.42□□□□□ -0.26
Trav16A0A075B653 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav16A0A075B653 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav16A0A075B653 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav16A0A075B653 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Trav16A0A075B653 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
Trav16A0A075B653 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC13.41□□□□□ -0.26
Trav16A0A075B653 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav16A0A075B653 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC13.41□□□□□ -0.26
Trav16A0A075B653 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav16A0A075B653 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav16A0A075B653 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav16A0A075B653 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC13.41□□□□□ -0.26
Trav16A0A075B653 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav16A0A075B653 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Trav16A0A075B653 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav16A0A075B653 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav16A0A075B653 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Trav16A0A075B653 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav16A0A075B653 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Trav16A0A075B653 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Trav16A0A075B653 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav16A0A075B653 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Trav16A0A075B653 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav16A0A075B653 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav16A0A075B653 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Trav16A0A075B653 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav16A0A075B653 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Trav16A0A075B653 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav16A0A075B653 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav16A0A075B653 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav16A0A075B653 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC13.41□□□□□ -0.26
Trav16A0A075B653 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav16A0A075B653 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav16A0A075B653 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav16A0A075B653 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav16A0A075B653 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav16A0A075B653 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav16A0A075B653 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav16A0A075B653 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav16A0A075B653 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav16A0A075B653 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav16A0A075B653 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav16A0A075B653 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
Trav16A0A075B653 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav16A0A075B653 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav16A0A075B653 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trav16A0A075B653 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav16A0A075B653 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC13.4□□□□□ -0.26
Trav16A0A075B653 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav16A0A075B653 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav16A0A075B653 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Trav16A0A075B653 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav16A0A075B653 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav16A0A075B653 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav16A0A075B653 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav16A0A075B653 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav16A0A075B653 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav16A0A075B653 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav16A0A075B653 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC13.4□□□□□ -0.26
Trav16A0A075B653 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Trav16A0A075B653 Reep4-203ENSMUST00000226563 1444 ntBASIC13.39□□□□□ -0.27
Trav16A0A075B653 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trav16A0A075B653 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trav16A0A075B653 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trav16A0A075B653 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav16A0A075B653 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav16A0A075B653 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav16A0A075B653 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav16A0A075B653 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav16A0A075B653 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav16A0A075B653 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav16A0A075B653 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav16A0A075B653 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC13.39□□□□□ -0.27
Trav16A0A075B653 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav16A0A075B653 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav16A0A075B653 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav16A0A075B653 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav16A0A075B653 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Trav16A0A075B653 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav16A0A075B653 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms