Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12-3A0A075B648 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12-3A0A075B648 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12-3A0A075B648 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12-3A0A075B648 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12-3A0A075B648 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav12-3A0A075B648 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12-3A0A075B648 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12-3A0A075B648 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12-3A0A075B648 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12-3A0A075B648 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav12-3A0A075B648 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12-3A0A075B648 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12-3A0A075B648 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12-3A0A075B648 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12-3A0A075B648 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Trav12-3A0A075B648 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trav12-3A0A075B648 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12-3A0A075B648 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trav12-3A0A075B648 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12-3A0A075B648 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav12-3A0A075B648 AC093043.3-201ENSMUST00000226531 2273 ntBASIC12.66□□□□□ -0.38
Trav12-3A0A075B648 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12-3A0A075B648 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12-3A0A075B648 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12-3A0A075B648 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Trav12-3A0A075B648 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12-3A0A075B648 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12-3A0A075B648 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12-3A0A075B648 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Trav12-3A0A075B648 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12-3A0A075B648 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trav12-3A0A075B648 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12-3A0A075B648 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav12-3A0A075B648 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12-3A0A075B648 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12-3A0A075B648 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Trav12-3A0A075B648 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12-3A0A075B648 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12-3A0A075B648 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12-3A0A075B648 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav12-3A0A075B648 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Trav12-3A0A075B648 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12-3A0A075B648 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12-3A0A075B648 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12-3A0A075B648 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12-3A0A075B648 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12-3A0A075B648 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Trav12-3A0A075B648 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC12.65□□□□□ -0.38
Trav12-3A0A075B648 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12-3A0A075B648 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12-3A0A075B648 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12-3A0A075B648 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12-3A0A075B648 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12-3A0A075B648 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12-3A0A075B648 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12-3A0A075B648 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12-3A0A075B648 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12-3A0A075B648 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trav12-3A0A075B648 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12-3A0A075B648 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav12-3A0A075B648 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC12.65□□□□□ -0.39
Trav12-3A0A075B648 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trav12-3A0A075B648 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trav12-3A0A075B648 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12-3A0A075B648 Gm16499-203ENSMUST00000204633 2177 ntBASIC12.64□□□□□ -0.39
Trav12-3A0A075B648 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12-3A0A075B648 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12-3A0A075B648 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12-3A0A075B648 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12-3A0A075B648 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trav12-3A0A075B648 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12-3A0A075B648 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12-3A0A075B648 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12-3A0A075B648 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC12.64□□□□□ -0.39
Trav12-3A0A075B648 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav12-3A0A075B648 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Trav12-3A0A075B648 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12-3A0A075B648 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12-3A0A075B648 Gm10167-201ENSMUST00000150411 1479 ntBASIC12.64□□□□□ -0.39
Trav12-3A0A075B648 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trav12-3A0A075B648 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12-3A0A075B648 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12-3A0A075B648 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12-3A0A075B648 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Trav12-3A0A075B648 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12-3A0A075B648 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12-3A0A075B648 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav12-3A0A075B648 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav12-3A0A075B648 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12-3A0A075B648 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12-3A0A075B648 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12-3A0A075B648 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12-3A0A075B648 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trav12-3A0A075B648 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12-3A0A075B648 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12-3A0A075B648 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12-3A0A075B648 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav12-3A0A075B648 Gm36858-201ENSMUST00000194501 2391 ntBASIC12.63□□□□□ -0.39
Trav12-3A0A075B648 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms