Protein–RNA interactions for Protein: A0A075B640

Trav7-6, T cell receptor alpha variable 7-6 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-6A0A075B640 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7-6A0A075B640 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trav7-6A0A075B640 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7-6A0A075B640 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7-6A0A075B640 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7-6A0A075B640 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7-6A0A075B640 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav7-6A0A075B640 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7-6A0A075B640 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7-6A0A075B640 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7-6A0A075B640 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7-6A0A075B640 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7-6A0A075B640 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC12.18□□□□□ -0.46
Trav7-6A0A075B640 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7-6A0A075B640 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7-6A0A075B640 CT010478.1-201ENSMUST00000220747 2787 ntBASIC12.18□□□□□ -0.46
Trav7-6A0A075B640 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav7-6A0A075B640 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7-6A0A075B640 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7-6A0A075B640 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7-6A0A075B640 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7-6A0A075B640 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7-6A0A075B640 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7-6A0A075B640 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7-6A0A075B640 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7-6A0A075B640 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7-6A0A075B640 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7-6A0A075B640 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7-6A0A075B640 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7-6A0A075B640 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7-6A0A075B640 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7-6A0A075B640 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7-6A0A075B640 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC12.17□□□□□ -0.46
Trav7-6A0A075B640 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC12.17□□□□□ -0.46
Trav7-6A0A075B640 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC12.17□□□□□ -0.46
Trav7-6A0A075B640 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7-6A0A075B640 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7-6A0A075B640 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav7-6A0A075B640 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7-6A0A075B640 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trav7-6A0A075B640 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7-6A0A075B640 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7-6A0A075B640 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7-6A0A075B640 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7-6A0A075B640 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav7-6A0A075B640 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trav7-6A0A075B640 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Trav7-6A0A075B640 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Trav7-6A0A075B640 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7-6A0A075B640 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7-6A0A075B640 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7-6A0A075B640 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7-6A0A075B640 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7-6A0A075B640 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trav7-6A0A075B640 Gm8969-201ENSMUST00000199694 526 ntBASIC12.16□□□□□ -0.46
Trav7-6A0A075B640 AV356131-201ENSMUST00000206201 750 ntBASIC12.16□□□□□ -0.46
Trav7-6A0A075B640 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC12.16□□□□□ -0.46
Trav7-6A0A075B640 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav7-6A0A075B640 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7-6A0A075B640 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trav7-6A0A075B640 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav7-6A0A075B640 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7-6A0A075B640 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Trav7-6A0A075B640 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7-6A0A075B640 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7-6A0A075B640 Gm42918-201ENSMUST00000199249 1580 ntBASIC12.16□□□□□ -0.46
Trav7-6A0A075B640 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7-6A0A075B640 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7-6A0A075B640 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7-6A0A075B640 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7-6A0A075B640 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7-6A0A075B640 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7-6A0A075B640 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7-6A0A075B640 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav7-6A0A075B640 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trav7-6A0A075B640 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7-6A0A075B640 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7-6A0A075B640 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7-6A0A075B640 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7-6A0A075B640 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7-6A0A075B640 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC12.15□□□□□ -0.46
Trav7-6A0A075B640 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7-6A0A075B640 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7-6A0A075B640 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav7-6A0A075B640 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7-6A0A075B640 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trav7-6A0A075B640 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav7-6A0A075B640 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trav7-6A0A075B640 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7-6A0A075B640 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7-6A0A075B640 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC12.15□□□□□ -0.46
Trav7-6A0A075B640 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7-6A0A075B640 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7-6A0A075B640 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7-6A0A075B640 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7-6A0A075B640 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7-6A0A075B640 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7-6A0A075B640 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7-6A0A075B640 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7-6A0A075B640 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms