Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav8n-2A0A075B633 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav8n-2A0A075B633 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav8n-2A0A075B633 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav8n-2A0A075B633 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav8n-2A0A075B633 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav8n-2A0A075B633 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav8n-2A0A075B633 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav8n-2A0A075B633 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav8n-2A0A075B633 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
Trav8n-2A0A075B633 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav8n-2A0A075B633 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Trav8n-2A0A075B633 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC15.86■□□□□ 0.13
Trav8n-2A0A075B633 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav8n-2A0A075B633 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav8n-2A0A075B633 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav8n-2A0A075B633 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav8n-2A0A075B633 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav8n-2A0A075B633 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav8n-2A0A075B633 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC15.86■□□□□ 0.13
Trav8n-2A0A075B633 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC15.86■□□□□ 0.13
Trav8n-2A0A075B633 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Trav8n-2A0A075B633 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav8n-2A0A075B633 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav8n-2A0A075B633 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav8n-2A0A075B633 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav8n-2A0A075B633 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav8n-2A0A075B633 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC15.86■□□□□ 0.13
Trav8n-2A0A075B633 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Trav8n-2A0A075B633 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav8n-2A0A075B633 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav8n-2A0A075B633 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav8n-2A0A075B633 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC15.85■□□□□ 0.13
Trav8n-2A0A075B633 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav8n-2A0A075B633 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav8n-2A0A075B633 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.85■□□□□ 0.13
Trav8n-2A0A075B633 Ighv6-1-201ENSMUST00000193612 343 ntBASIC15.85■□□□□ 0.13
Trav8n-2A0A075B633 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC15.85■□□□□ 0.13
Trav8n-2A0A075B633 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav8n-2A0A075B633 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav8n-2A0A075B633 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Trav8n-2A0A075B633 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav8n-2A0A075B633 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav8n-2A0A075B633 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav8n-2A0A075B633 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav8n-2A0A075B633 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav8n-2A0A075B633 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav8n-2A0A075B633 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav8n-2A0A075B633 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Trav8n-2A0A075B633 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav8n-2A0A075B633 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Trav8n-2A0A075B633 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav8n-2A0A075B633 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav8n-2A0A075B633 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav8n-2A0A075B633 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav8n-2A0A075B633 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav8n-2A0A075B633 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav8n-2A0A075B633 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav8n-2A0A075B633 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav8n-2A0A075B633 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.84■□□□□ 0.13
Trav8n-2A0A075B633 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav8n-2A0A075B633 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav8n-2A0A075B633 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav8n-2A0A075B633 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav8n-2A0A075B633 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC15.84■□□□□ 0.13
Trav8n-2A0A075B633 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav8n-2A0A075B633 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Trav8n-2A0A075B633 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav8n-2A0A075B633 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Trav8n-2A0A075B633 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav8n-2A0A075B633 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Trav8n-2A0A075B633 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav8n-2A0A075B633 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.83■□□□□ 0.13
Trav8n-2A0A075B633 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav8n-2A0A075B633 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Trav8n-2A0A075B633 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav8n-2A0A075B633 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav8n-2A0A075B633 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.83■□□□□ 0.12
Trav8n-2A0A075B633 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC15.83■□□□□ 0.12
Trav8n-2A0A075B633 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav8n-2A0A075B633 AC133598.3-202ENSMUST00000224219 531 ntBASIC15.83■□□□□ 0.12
Trav8n-2A0A075B633 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav8n-2A0A075B633 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav8n-2A0A075B633 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
Trav8n-2A0A075B633 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.83■□□□□ 0.12
Trav8n-2A0A075B633 Cxcl14-202ENSMUST00000224801 1467 ntBASIC15.83■□□□□ 0.12
Trav8n-2A0A075B633 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav8n-2A0A075B633 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav8n-2A0A075B633 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav8n-2A0A075B633 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav8n-2A0A075B633 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Trav8n-2A0A075B633 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav8n-2A0A075B633 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav8n-2A0A075B633 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Trav8n-2A0A075B633 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav8n-2A0A075B633 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav8n-2A0A075B633 Spr-ps1-201ENSMUST00000089584 605 ntBASIC15.82■□□□□ 0.12
Trav8n-2A0A075B633 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trav8n-2A0A075B633 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav8n-2A0A075B633 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms