Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Gm8249-201ENSMUST00000219225 465 ntBASIC3.24□□□□□ -1.89
Cldn9Q9Z0S7 Gm8274-201ENSMUST00000219820 463 ntBASIC3.24□□□□□ -1.89
Cldn9Q9Z0S7 Gm18921-201ENSMUST00000221798 366 ntBASIC3.24□□□□□ -1.89
Cldn9Q9Z0S7 Gm36525-201ENSMUST00000222590 638 ntTSL 5 BASIC3.24□□□□□ -1.89
Cldn9Q9Z0S7 Gm4987-201ENSMUST00000078326 408 ntBASIC3.24□□□□□ -1.89
Cldn9Q9Z0S7 Olfr203-201ENSMUST00000089305 924 ntBASIC3.24□□□□□ -1.89
Cldn9Q9Z0S7 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Cldn9Q9Z0S7 Gm37970-201ENSMUST00000193865 1732 ntBASIC3.24□□□□□ -1.89
Cldn9Q9Z0S7 AC153887.2-201ENSMUST00000219160 3838 ntBASIC3.24□□□□□ -1.89
Cldn9Q9Z0S7 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Cldn9Q9Z0S7 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Cldn9Q9Z0S7 AC155830.1-201ENSMUST00000220050 3836 ntBASIC3.23□□□□□ -1.89
Cldn9Q9Z0S7 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Cldn9Q9Z0S7 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Cldn9Q9Z0S7 Olfr168-202ENSMUST00000213480 2205 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Cldn9Q9Z0S7 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Cldn9Q9Z0S7 Gm773-201ENSMUST00000101561 951 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Cldn9Q9Z0S7 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Cldn9Q9Z0S7 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Cldn9Q9Z0S7 Gm16400-201ENSMUST00000116523 1029 ntBASIC3.23□□□□□ -1.89
Cldn9Q9Z0S7 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC3.23□□□□□ -1.89
Cldn9Q9Z0S7 Gm13379-201ENSMUST00000118053 621 ntBASIC3.23□□□□□ -1.89
Cldn9Q9Z0S7 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC3.23□□□□□ -1.89
Cldn9Q9Z0S7 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC3.23□□□□□ -1.89
Cldn9Q9Z0S7 Gm15060-201ENSMUST00000119550 948 ntBASIC3.23□□□□□ -1.89
Cldn9Q9Z0S7 Gm15488-201ENSMUST00000121682 670 ntBASIC3.23□□□□□ -1.89
Cldn9Q9Z0S7 Gm24666-201ENSMUST00000158937 167 ntBASIC3.23□□□□□ -1.89
Cldn9Q9Z0S7 Gm10075-201ENSMUST00000162030 545 ntBASIC3.23□□□□□ -1.89
Cldn9Q9Z0S7 Gm8902-201ENSMUST00000174341 1096 ntBASIC3.23□□□□□ -1.89
Cldn9Q9Z0S7 Gm24819-201ENSMUST00000175094 166 ntBASIC3.23□□□□□ -1.89
Cldn9Q9Z0S7 Spin2g-201ENSMUST00000178425 687 ntBASIC3.23□□□□□ -1.89
Cldn9Q9Z0S7 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC3.23□□□□□ -1.89
Cldn9Q9Z0S7 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC3.23□□□□□ -1.89
Cldn9Q9Z0S7 Gm26933-201ENSMUST00000182320 827 ntBASIC3.23□□□□□ -1.89
Cldn9Q9Z0S7 Mir6408-201ENSMUST00000183643 91 ntBASIC3.23□□□□□ -1.89
Cldn9Q9Z0S7 Gm27580-201ENSMUST00000183666 149 ntBASIC3.23□□□□□ -1.89
Cldn9Q9Z0S7 Mir6413-201ENSMUST00000184049 108 ntBASIC3.23□□□□□ -1.89
Cldn9Q9Z0S7 Gm19637-201ENSMUST00000185933 579 ntBASIC3.23□□□□□ -1.89
Cldn9Q9Z0S7 Gm28141-201ENSMUST00000186676 342 ntBASIC3.23□□□□□ -1.89
Cldn9Q9Z0S7 Gm44300-201ENSMUST00000196792 121 ntBASIC3.23□□□□□ -1.89
Cldn9Q9Z0S7 Gm40155-201ENSMUST00000198291 818 ntTSL 3 BASIC3.23□□□□□ -1.89
Cldn9Q9Z0S7 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Cldn9Q9Z0S7 Gm6064-201ENSMUST00000203999 454 ntBASIC3.23□□□□□ -1.89
Cldn9Q9Z0S7 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC3.23□□□□□ -1.89
Cldn9Q9Z0S7 AC132465.3-201ENSMUST00000219326 195 ntBASIC3.23□□□□□ -1.89
Cldn9Q9Z0S7 AL590503.1-201ENSMUST00000222053 321 ntBASIC3.23□□□□□ -1.89
Cldn9Q9Z0S7 AC116395.1-201ENSMUST00000225480 1143 ntBASIC3.23□□□□□ -1.89
Cldn9Q9Z0S7 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC3.23□□□□□ -1.89
Cldn9Q9Z0S7 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC3.23□□□□□ -1.89
Cldn9Q9Z0S7 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Cldn9Q9Z0S7 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
Cldn9Q9Z0S7 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.23□□□□□ -1.89
Cldn9Q9Z0S7 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
Cldn9Q9Z0S7 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
Cldn9Q9Z0S7 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Cldn9Q9Z0S7 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Cldn9Q9Z0S7 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Cldn9Q9Z0S7 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
Cldn9Q9Z0S7 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Cldn9Q9Z0S7 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.22□□□□□ -1.89
Cldn9Q9Z0S7 AC124746.1-201ENSMUST00000227535 1300 ntBASIC3.22□□□□□ -1.89
Cldn9Q9Z0S7 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
Cldn9Q9Z0S7 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Cldn9Q9Z0S7 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Cldn9Q9Z0S7 Gm6429-201ENSMUST00000117144 475 ntBASIC3.22□□□□□ -1.89
Cldn9Q9Z0S7 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC3.22□□□□□ -1.89
Cldn9Q9Z0S7 Gm14795-201ENSMUST00000118461 471 ntBASIC3.22□□□□□ -1.89
Cldn9Q9Z0S7 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC3.22□□□□□ -1.89
Cldn9Q9Z0S7 Gm15116-201ENSMUST00000122248 663 ntBASIC3.22□□□□□ -1.89
Cldn9Q9Z0S7 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC3.22□□□□□ -1.89
Cldn9Q9Z0S7 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Cldn9Q9Z0S7 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Cldn9Q9Z0S7 Gm22320-201ENSMUST00000157149 312 ntBASIC3.22□□□□□ -1.89
Cldn9Q9Z0S7 Gm24875-201ENSMUST00000158888 104 ntBASIC3.22□□□□□ -1.89
Cldn9Q9Z0S7 Ear-ps10-201ENSMUST00000161871 460 ntBASIC3.22□□□□□ -1.89
Cldn9Q9Z0S7 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC3.22□□□□□ -1.89
Cldn9Q9Z0S7 Gm25817-201ENSMUST00000177758 121 ntBASIC3.22□□□□□ -1.89
Cldn9Q9Z0S7 Gm22910-201ENSMUST00000178568 132 ntBASIC3.22□□□□□ -1.89
Cldn9Q9Z0S7 Gm25944-201ENSMUST00000178758 94 ntBASIC3.22□□□□□ -1.89
Cldn9Q9Z0S7 Gm24766-201ENSMUST00000179182 121 ntBASIC3.22□□□□□ -1.89
Cldn9Q9Z0S7 Gm26988-201ENSMUST00000183296 945 ntBASIC3.22□□□□□ -1.89
Cldn9Q9Z0S7 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC3.22□□□□□ -1.89
Cldn9Q9Z0S7 1700101O22Rik-201ENSMUST00000187396 339 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Cldn9Q9Z0S7 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.22□□□□□ -1.89
Cldn9Q9Z0S7 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC3.22□□□□□ -1.89
Cldn9Q9Z0S7 Gm17790-201ENSMUST00000191545 1228 ntBASIC3.22□□□□□ -1.89
Cldn9Q9Z0S7 Gm37098-201ENSMUST00000192290 244 ntBASIC3.22□□□□□ -1.89
Cldn9Q9Z0S7 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC3.22□□□□□ -1.89
Cldn9Q9Z0S7 Gm37005-201ENSMUST00000193281 1164 ntBASIC3.22□□□□□ -1.89
Cldn9Q9Z0S7 Gm42516-201ENSMUST00000198691 767 ntBASIC3.22□□□□□ -1.89
Cldn9Q9Z0S7 Gm42474-201ENSMUST00000201073 505 ntBASIC3.22□□□□□ -1.89
Cldn9Q9Z0S7 Gm18602-201ENSMUST00000209794 851 ntBASIC3.22□□□□□ -1.89
Cldn9Q9Z0S7 Gm7380-201ENSMUST00000211599 466 ntBASIC3.22□□□□□ -1.89
Cldn9Q9Z0S7 Gm7034-201ENSMUST00000218638 645 ntBASIC3.22□□□□□ -1.89
Cldn9Q9Z0S7 Gm7198-201ENSMUST00000219635 1074 ntBASIC3.22□□□□□ -1.89
Cldn9Q9Z0S7 Gm6841-201ENSMUST00000220602 598 ntBASIC3.22□□□□□ -1.89
Cldn9Q9Z0S7 Gm18116-201ENSMUST00000220920 537 ntBASIC3.22□□□□□ -1.89
Cldn9Q9Z0S7 Gm3565-201ENSMUST00000222670 609 ntBASIC3.22□□□□□ -1.89
Cldn9Q9Z0S7 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Cldn9Q9Z0S7 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms