Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 BC051076-202ENSMUST00000199477 2868 ntBASIC3.19□□□□□ -1.9
Ccdc3Q9D6Y1 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Ccdc3Q9D6Y1 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Ccdc3Q9D6Y1 Gm14581-201ENSMUST00000121726 198 ntBASIC3.19□□□□□ -1.9
Ccdc3Q9D6Y1 Gm23234-201ENSMUST00000157304 134 ntBASIC3.19□□□□□ -1.9
Ccdc3Q9D6Y1 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
Ccdc3Q9D6Y1 Gm28390-201ENSMUST00000185212 700 ntBASIC3.19□□□□□ -1.9
Ccdc3Q9D6Y1 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC3.19□□□□□ -1.9
Ccdc3Q9D6Y1 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC3.19□□□□□ -1.9
Ccdc3Q9D6Y1 Gm6510-201ENSMUST00000195916 574 ntBASIC3.19□□□□□ -1.9
Ccdc3Q9D6Y1 Gm43704-201ENSMUST00000196164 496 ntBASIC3.19□□□□□ -1.9
Ccdc3Q9D6Y1 Gm44393-201ENSMUST00000197418 138 ntBASIC3.19□□□□□ -1.9
Ccdc3Q9D6Y1 Gm9023-201ENSMUST00000198408 1038 ntBASIC3.19□□□□□ -1.9
Ccdc3Q9D6Y1 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC3.19□□□□□ -1.9
Ccdc3Q9D6Y1 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Ccdc3Q9D6Y1 Gm9370-201ENSMUST00000222787 609 ntBASIC3.19□□□□□ -1.9
Ccdc3Q9D6Y1 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC3.19□□□□□ -1.9
Ccdc3Q9D6Y1 Vmn1r72-201ENSMUST00000053134 921 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Ccdc3Q9D6Y1 Olfr919-201ENSMUST00000071425 948 ntAPPRIS P2 BASIC3.19□□□□□ -1.9
Ccdc3Q9D6Y1 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Ccdc3Q9D6Y1 Gm42534-201ENSMUST00000196063 1754 ntBASIC3.19□□□□□ -1.9
Ccdc3Q9D6Y1 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Ccdc3Q9D6Y1 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
Ccdc3Q9D6Y1 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
Ccdc3Q9D6Y1 Gm37970-201ENSMUST00000193865 1732 ntBASIC3.19□□□□□ -1.9
Ccdc3Q9D6Y1 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Ccdc3Q9D6Y1 Olfr1112-202ENSMUST00000216772 1443 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Ccdc3Q9D6Y1 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Ccdc3Q9D6Y1 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.18□□□□□ -1.9
Ccdc3Q9D6Y1 Gm7470-201ENSMUST00000194219 2095 ntBASIC3.18□□□□□ -1.9
Ccdc3Q9D6Y1 Gm19335-201ENSMUST00000195836 2069 ntBASIC3.18□□□□□ -1.9
Ccdc3Q9D6Y1 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC3.18□□□□□ -1.9
Ccdc3Q9D6Y1 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Ccdc3Q9D6Y1 Gm24096-201ENSMUST00000103905 110 ntBASIC3.18□□□□□ -1.9
Ccdc3Q9D6Y1 Gm25539-201ENSMUST00000116886 122 ntBASIC3.18□□□□□ -1.9
Ccdc3Q9D6Y1 Gm11433-201ENSMUST00000118318 228 ntBASIC3.18□□□□□ -1.9
Ccdc3Q9D6Y1 Gm12268-201ENSMUST00000118398 442 ntBASIC3.18□□□□□ -1.9
Ccdc3Q9D6Y1 Gm13228-201ENSMUST00000118937 634 ntBASIC3.18□□□□□ -1.9
Ccdc3Q9D6Y1 Gm3788-201ENSMUST00000119949 136 ntBASIC3.18□□□□□ -1.9
Ccdc3Q9D6Y1 Gm15244-201ENSMUST00000121122 130 ntBASIC3.18□□□□□ -1.9
Ccdc3Q9D6Y1 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
Ccdc3Q9D6Y1 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC3.18□□□□□ -1.9
Ccdc3Q9D6Y1 Vmn2r-ps124-201ENSMUST00000176236 903 ntBASIC3.18□□□□□ -1.9
Ccdc3Q9D6Y1 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Ccdc3Q9D6Y1 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Ccdc3Q9D6Y1 Gm26933-201ENSMUST00000182320 827 ntBASIC3.18□□□□□ -1.9
Ccdc3Q9D6Y1 Gm27315-201ENSMUST00000183977 154 ntBASIC3.18□□□□□ -1.9
Ccdc3Q9D6Y1 Gm7870-201ENSMUST00000184467 616 ntBASIC3.18□□□□□ -1.9
Ccdc3Q9D6Y1 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC3.18□□□□□ -1.9
Ccdc3Q9D6Y1 Igkv2-113-201ENSMUST00000196138 362 ntBASIC3.18□□□□□ -1.9
Ccdc3Q9D6Y1 Gm43415-201ENSMUST00000201934 750 ntBASIC3.18□□□□□ -1.9
Ccdc3Q9D6Y1 Sult2a7-202ENSMUST00000209744 792 ntTSL 5 BASIC3.18□□□□□ -1.9
Ccdc3Q9D6Y1 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC3.18□□□□□ -1.9
Ccdc3Q9D6Y1 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC3.18□□□□□ -1.9
Ccdc3Q9D6Y1 CT486006.1-201ENSMUST00000216797 227 ntTSL 5 BASIC3.18□□□□□ -1.9
Ccdc3Q9D6Y1 AC144783.2-201ENSMUST00000219089 195 ntBASIC3.18□□□□□ -1.9
Ccdc3Q9D6Y1 AC153887.2-201ENSMUST00000219160 3838 ntBASIC3.18□□□□□ -1.9
Ccdc3Q9D6Y1 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Ccdc3Q9D6Y1 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC3.18□□□□□ -1.9
Ccdc3Q9D6Y1 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Ccdc3Q9D6Y1 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Ccdc3Q9D6Y1 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Ccdc3Q9D6Y1 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
Ccdc3Q9D6Y1 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Ccdc3Q9D6Y1 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Ccdc3Q9D6Y1 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Ccdc3Q9D6Y1 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Ccdc3Q9D6Y1 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Ccdc3Q9D6Y1 Gm14163-201ENSMUST00000117342 217 ntBASIC3.17□□□□□ -1.9
Ccdc3Q9D6Y1 Gm12568-201ENSMUST00000117362 624 ntBASIC3.17□□□□□ -1.9
Ccdc3Q9D6Y1 Gm11576-201ENSMUST00000117433 417 ntBASIC3.17□□□□□ -1.9
Ccdc3Q9D6Y1 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC3.17□□□□□ -1.9
Ccdc3Q9D6Y1 Gm13379-201ENSMUST00000118053 621 ntBASIC3.17□□□□□ -1.9
Ccdc3Q9D6Y1 Gm14771-201ENSMUST00000118249 203 ntBASIC3.17□□□□□ -1.9
Ccdc3Q9D6Y1 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC3.17□□□□□ -1.9
Ccdc3Q9D6Y1 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC3.17□□□□□ -1.9
Ccdc3Q9D6Y1 Gm8840-201ENSMUST00000122454 386 ntBASIC3.17□□□□□ -1.9
Ccdc3Q9D6Y1 Gm6374-201ENSMUST00000159051 788 ntBASIC3.17□□□□□ -1.9
Ccdc3Q9D6Y1 Gm10075-201ENSMUST00000162030 545 ntBASIC3.17□□□□□ -1.9
Ccdc3Q9D6Y1 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC3.17□□□□□ -1.9
Ccdc3Q9D6Y1 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC3.17□□□□□ -1.9
Ccdc3Q9D6Y1 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC3.17□□□□□ -1.9
Ccdc3Q9D6Y1 Gm28141-201ENSMUST00000186676 342 ntBASIC3.17□□□□□ -1.9
Ccdc3Q9D6Y1 Gm28785-201ENSMUST00000187478 379 ntBASIC3.17□□□□□ -1.9
Ccdc3Q9D6Y1 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.17□□□□□ -1.9
Ccdc3Q9D6Y1 Gm29359-201ENSMUST00000191007 495 ntTSL 5 BASIC3.17□□□□□ -1.9
Ccdc3Q9D6Y1 Gm20162-201ENSMUST00000193629 871 ntBASIC3.17□□□□□ -1.9
Ccdc3Q9D6Y1 Gm37490-201ENSMUST00000195566 724 ntBASIC3.17□□□□□ -1.9
Ccdc3Q9D6Y1 Amd-ps5-201ENSMUST00000198406 989 ntBASIC3.17□□□□□ -1.9
Ccdc3Q9D6Y1 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC3.17□□□□□ -1.9
Ccdc3Q9D6Y1 Gm45778-201ENSMUST00000211959 153 ntBASIC3.17□□□□□ -1.9
Ccdc3Q9D6Y1 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Ccdc3Q9D6Y1 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Ccdc3Q9D6Y1 Olfr69-201ENSMUST00000106878 2829 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Ccdc3Q9D6Y1 Gm6545-201ENSMUST00000217186 1786 ntBASIC3.17□□□□□ -1.9
Ccdc3Q9D6Y1 Gm43300-201ENSMUST00000198540 2043 ntBASIC3.17□□□□□ -1.9
Ccdc3Q9D6Y1 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Ccdc3Q9D6Y1 Gm14416-201ENSMUST00000118630 2308 ntBASIC3.16□□□□□ -1.9
Ccdc3Q9D6Y1 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Ccdc3Q9D6Y1 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms