Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Ccdc9Q8VC31 Gm12112-201ENSMUST00000117772 231 ntBASIC4.83□□□□□ -1.64
Ccdc9Q8VC31 Gm14750-201ENSMUST00000118262 516 ntBASIC4.83□□□□□ -1.64
Ccdc9Q8VC31 Gm12230-201ENSMUST00000118301 454 ntBASIC4.83□□□□□ -1.64
Ccdc9Q8VC31 Gm13511-201ENSMUST00000121167 363 ntBASIC4.83□□□□□ -1.64
Ccdc9Q8VC31 Gm15116-201ENSMUST00000122248 663 ntBASIC4.83□□□□□ -1.64
Ccdc9Q8VC31 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
Ccdc9Q8VC31 Gm15905-201ENSMUST00000137042 298 ntBASIC4.83□□□□□ -1.64
Ccdc9Q8VC31 Gm24251-201ENSMUST00000157324 114 ntBASIC4.83□□□□□ -1.64
Ccdc9Q8VC31 Gm23782-201ENSMUST00000157939 120 ntBASIC4.83□□□□□ -1.64
Ccdc9Q8VC31 Gm26034-201ENSMUST00000158154 116 ntBASIC4.83□□□□□ -1.64
Ccdc9Q8VC31 Gm22501-201ENSMUST00000158981 127 ntBASIC4.83□□□□□ -1.64
Ccdc9Q8VC31 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Ccdc9Q8VC31 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Ccdc9Q8VC31 Mir3106-201ENSMUST00000175401 82 ntBASIC4.83□□□□□ -1.64
Ccdc9Q8VC31 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC4.83□□□□□ -1.64
Ccdc9Q8VC31 Gm27236-201ENSMUST00000184147 442 ntBASIC4.83□□□□□ -1.64
Ccdc9Q8VC31 Mir1957b-201ENSMUST00000184608 123 ntBASIC4.83□□□□□ -1.64
Ccdc9Q8VC31 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC4.83□□□□□ -1.64
Ccdc9Q8VC31 Gm18727-201ENSMUST00000185981 553 ntBASIC4.83□□□□□ -1.64
Ccdc9Q8VC31 Gm29641-201ENSMUST00000188955 259 ntBASIC4.83□□□□□ -1.64
Ccdc9Q8VC31 Gm9687-201ENSMUST00000189312 602 ntBASIC4.83□□□□□ -1.64
Ccdc9Q8VC31 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC4.83□□□□□ -1.64
Ccdc9Q8VC31 Gm8599-201ENSMUST00000193033 457 ntBASIC4.83□□□□□ -1.64
Ccdc9Q8VC31 Gm37577-203ENSMUST00000194712 991 ntTSL 5 BASIC4.83□□□□□ -1.64
Ccdc9Q8VC31 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC4.83□□□□□ -1.64
Ccdc9Q8VC31 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Ccdc9Q8VC31 Gm18423-201ENSMUST00000205144 1074 ntBASIC4.83□□□□□ -1.64
Ccdc9Q8VC31 Gm18410-201ENSMUST00000207199 577 ntBASIC4.83□□□□□ -1.64
Ccdc9Q8VC31 Gm18258-201ENSMUST00000210413 542 ntBASIC4.83□□□□□ -1.64
Ccdc9Q8VC31 Gm8423-201ENSMUST00000211387 607 ntBASIC4.83□□□□□ -1.64
Ccdc9Q8VC31 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Ccdc9Q8VC31 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC4.83□□□□□ -1.64
Ccdc9Q8VC31 Gm45814-201ENSMUST00000212646 775 ntBASIC4.83□□□□□ -1.64
Ccdc9Q8VC31 AC164424.1-201ENSMUST00000221690 170 ntBASIC4.83□□□□□ -1.64
Ccdc9Q8VC31 AC102435.1-201ENSMUST00000222199 908 ntTSL 5 BASIC4.83□□□□□ -1.64
Ccdc9Q8VC31 AC131085.1-201ENSMUST00000224746 656 ntBASIC4.83□□□□□ -1.64
Ccdc9Q8VC31 AC154329.2-201ENSMUST00000225257 383 ntBASIC4.83□□□□□ -1.64
Ccdc9Q8VC31 Gm7257-201ENSMUST00000041537 519 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Ccdc9Q8VC31 Olfr729-201ENSMUST00000061020 972 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Ccdc9Q8VC31 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
Ccdc9Q8VC31 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Ccdc9Q8VC31 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Ccdc9Q8VC31 Gm9732-202ENSMUST00000163912 1757 ntAPPRIS P5 TSL 5 BASIC4.83□□□□□ -1.64
Ccdc9Q8VC31 Gm43047-201ENSMUST00000200089 3460 ntBASIC4.82□□□□□ -1.64
Ccdc9Q8VC31 Slc22a28-201ENSMUST00000065651 2004 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Ccdc9Q8VC31 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
Ccdc9Q8VC31 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Ccdc9Q8VC31 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC4.82□□□□□ -1.64
Ccdc9Q8VC31 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC4.82□□□□□ -1.64
Ccdc9Q8VC31 Gm11923-201ENSMUST00000118135 508 ntBASIC4.82□□□□□ -1.64
Ccdc9Q8VC31 Gm15951-201ENSMUST00000118377 400 ntBASIC4.82□□□□□ -1.64
Ccdc9Q8VC31 Gm22345-201ENSMUST00000122644 107 ntBASIC4.82□□□□□ -1.64
Ccdc9Q8VC31 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC4.82□□□□□ -1.64
Ccdc9Q8VC31 Gm11281-201ENSMUST00000141391 576 ntBASIC4.82□□□□□ -1.64
Ccdc9Q8VC31 Gm24061-201ENSMUST00000157489 120 ntBASIC4.82□□□□□ -1.64
Ccdc9Q8VC31 Gm15508-201ENSMUST00000160330 325 ntBASIC4.82□□□□□ -1.64
Ccdc9Q8VC31 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Ccdc9Q8VC31 Gm26652-202ENSMUST00000181672 475 ntBASIC4.82□□□□□ -1.64
Ccdc9Q8VC31 Gm27659-201ENSMUST00000183472 98 ntBASIC4.82□□□□□ -1.64
Ccdc9Q8VC31 Gm7654-201ENSMUST00000186738 683 ntBASIC4.82□□□□□ -1.64
Ccdc9Q8VC31 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC4.82□□□□□ -1.64
Ccdc9Q8VC31 Gm29138-201ENSMUST00000191444 348 ntBASIC4.82□□□□□ -1.64
Ccdc9Q8VC31 Gm37431-201ENSMUST00000195102 111 ntBASIC4.82□□□□□ -1.64
Ccdc9Q8VC31 Gm29950-201ENSMUST00000195273 237 ntBASIC4.82□□□□□ -1.64
Ccdc9Q8VC31 Gm43704-201ENSMUST00000196164 496 ntBASIC4.82□□□□□ -1.64
Ccdc9Q8VC31 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC4.82□□□□□ -1.64
Ccdc9Q8VC31 Gm44404-201ENSMUST00000203979 636 ntBASIC4.82□□□□□ -1.64
Ccdc9Q8VC31 Gm44665-201ENSMUST00000205381 251 ntBASIC4.82□□□□□ -1.64
Ccdc9Q8VC31 Gm9373-201ENSMUST00000208724 599 ntBASIC4.82□□□□□ -1.64
Ccdc9Q8VC31 Gm45673-201ENSMUST00000210293 358 ntBASIC4.82□□□□□ -1.64
Ccdc9Q8VC31 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC4.82□□□□□ -1.64
Ccdc9Q8VC31 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Ccdc9Q8VC31 Gm5175-202ENSMUST00000219699 529 ntBASIC4.82□□□□□ -1.64
Ccdc9Q8VC31 AC153975.1-201ENSMUST00000220087 926 ntBASIC4.82□□□□□ -1.64
Ccdc9Q8VC31 AC117240.2-201ENSMUST00000220921 263 ntBASIC4.82□□□□□ -1.64
Ccdc9Q8VC31 AC121114.1-201ENSMUST00000228522 570 ntBASIC4.82□□□□□ -1.64
Ccdc9Q8VC31 Capza3-201ENSMUST00000043797 1222 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Ccdc9Q8VC31 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Ccdc9Q8VC31 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Ccdc9Q8VC31 Gm25810-201ENSMUST00000082752 108 ntBASIC4.82□□□□□ -1.64
Ccdc9Q8VC31 Gm23378-201ENSMUST00000082942 107 ntBASIC4.82□□□□□ -1.64
Ccdc9Q8VC31 Gm23460-201ENSMUST00000083258 109 ntBASIC4.82□□□□□ -1.64
Ccdc9Q8VC31 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC4.82□□□□□ -1.64
Ccdc9Q8VC31 Gm7381-201ENSMUST00000098958 300 ntBASIC4.82□□□□□ -1.64
Ccdc9Q8VC31 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Ccdc9Q8VC31 Gm37983-201ENSMUST00000193207 2006 ntBASIC4.82□□□□□ -1.64
Ccdc9Q8VC31 Gm37970-201ENSMUST00000193865 1732 ntBASIC4.81□□□□□ -1.64
Ccdc9Q8VC31 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Ccdc9Q8VC31 Gm22498-201ENSMUST00000104497 86 ntBASIC4.81□□□□□ -1.64
Ccdc9Q8VC31 Scimp-202ENSMUST00000108534 1080 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ccdc9Q8VC31 Gm14879-201ENSMUST00000117308 507 ntBASIC4.81□□□□□ -1.64
Ccdc9Q8VC31 Xlr5d-ps-201ENSMUST00000117501 782 ntBASIC4.81□□□□□ -1.64
Ccdc9Q8VC31 Tcea1-ps1-201ENSMUST00000117942 904 ntBASIC4.81□□□□□ -1.64
Ccdc9Q8VC31 Defa-ps15-201ENSMUST00000118178 477 ntBASIC4.81□□□□□ -1.64
Ccdc9Q8VC31 Gm12719-201ENSMUST00000118859 241 ntBASIC4.81□□□□□ -1.64
Ccdc9Q8VC31 Gm11798-201ENSMUST00000119150 421 ntBASIC4.81□□□□□ -1.64
Ccdc9Q8VC31 Gm15244-201ENSMUST00000121122 130 ntBASIC4.81□□□□□ -1.64
Ccdc9Q8VC31 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Ccdc9Q8VC31 Gm15733-201ENSMUST00000132957 242 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 98.8 ms