Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Vps53Q8CCB4 Gm28362-201ENSMUST00000189430 2420 ntBASIC4.88□□□□□ -1.63
Vps53Q8CCB4 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Vps53Q8CCB4 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Vps53Q8CCB4 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Vps53Q8CCB4 Gm37211-201ENSMUST00000193392 3433 ntBASIC4.88□□□□□ -1.63
Vps53Q8CCB4 Gm16436-201ENSMUST00000121510 1607 ntBASIC4.88□□□□□ -1.63
Vps53Q8CCB4 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC4.88□□□□□ -1.63
Vps53Q8CCB4 Mir147-201ENSMUST00000102354 79 ntBASIC4.88□□□□□ -1.63
Vps53Q8CCB4 Gm25420-201ENSMUST00000104216 127 ntBASIC4.88□□□□□ -1.63
Vps53Q8CCB4 Gm13743-201ENSMUST00000121486 724 ntBASIC4.88□□□□□ -1.63
Vps53Q8CCB4 Gm11931-201ENSMUST00000121630 447 ntBASIC4.88□□□□□ -1.63
Vps53Q8CCB4 Gm12755-201ENSMUST00000122297 282 ntBASIC4.88□□□□□ -1.63
Vps53Q8CCB4 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Vps53Q8CCB4 Gm11234-201ENSMUST00000141030 845 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Vps53Q8CCB4 Gm25150-201ENSMUST00000157121 60 ntBASIC4.88□□□□□ -1.63
Vps53Q8CCB4 Gm24910-201ENSMUST00000157289 272 ntBASIC4.88□□□□□ -1.63
Vps53Q8CCB4 Gm7438-201ENSMUST00000177664 639 ntBASIC4.88□□□□□ -1.63
Vps53Q8CCB4 Gm7408-201ENSMUST00000178014 639 ntBASIC4.88□□□□□ -1.63
Vps53Q8CCB4 Gm7386-201ENSMUST00000178020 639 ntBASIC4.88□□□□□ -1.63
Vps53Q8CCB4 Gm3657-201ENSMUST00000178170 639 ntBASIC4.88□□□□□ -1.63
Vps53Q8CCB4 Gm7415-201ENSMUST00000178205 639 ntBASIC4.88□□□□□ -1.63
Vps53Q8CCB4 Gm7391-201ENSMUST00000178680 639 ntBASIC4.88□□□□□ -1.63
Vps53Q8CCB4 Gm28343-201ENSMUST00000185386 112 ntBASIC4.88□□□□□ -1.63
Vps53Q8CCB4 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC4.88□□□□□ -1.63
Vps53Q8CCB4 Gm36382-201ENSMUST00000198892 541 ntBASIC4.88□□□□□ -1.63
Vps53Q8CCB4 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC4.88□□□□□ -1.63
Vps53Q8CCB4 Gm45192-201ENSMUST00000206749 283 ntBASIC4.88□□□□□ -1.63
Vps53Q8CCB4 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC4.88□□□□□ -1.63
Vps53Q8CCB4 Gm39197-201ENSMUST00000212069 457 ntBASIC4.88□□□□□ -1.63
Vps53Q8CCB4 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC4.88□□□□□ -1.63
Vps53Q8CCB4 Gm18225-201ENSMUST00000216708 742 ntBASIC4.88□□□□□ -1.63
Vps53Q8CCB4 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC4.88□□□□□ -1.63
Vps53Q8CCB4 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Vps53Q8CCB4 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Vps53Q8CCB4 BC048502-201ENSMUST00000065978 718 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Vps53Q8CCB4 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Vps53Q8CCB4 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Vps53Q8CCB4 Snord14e-201ENSMUST00000082857 90 ntBASIC4.88□□□□□ -1.63
Vps53Q8CCB4 Gm23516-201ENSMUST00000093728 107 ntBASIC4.88□□□□□ -1.63
Vps53Q8CCB4 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Vps53Q8CCB4 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Vps53Q8CCB4 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
Vps53Q8CCB4 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Vps53Q8CCB4 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Vps53Q8CCB4 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Vps53Q8CCB4 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Vps53Q8CCB4 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Vps53Q8CCB4 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
Vps53Q8CCB4 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Vps53Q8CCB4 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC4.87□□□□□ -1.63
Vps53Q8CCB4 Gm15426-201ENSMUST00000117823 556 ntBASIC4.87□□□□□ -1.63
Vps53Q8CCB4 Gm13379-201ENSMUST00000118053 621 ntBASIC4.87□□□□□ -1.63
Vps53Q8CCB4 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC4.87□□□□□ -1.63
Vps53Q8CCB4 Gm2318-201ENSMUST00000119623 639 ntBASIC4.87□□□□□ -1.63
Vps53Q8CCB4 Gm13170-201ENSMUST00000119716 643 ntBASIC4.87□□□□□ -1.63
Vps53Q8CCB4 Gm13687-201ENSMUST00000119857 282 ntBASIC4.87□□□□□ -1.63
Vps53Q8CCB4 Gm15387-201ENSMUST00000120421 648 ntBASIC4.87□□□□□ -1.63
Vps53Q8CCB4 Gm2768-201ENSMUST00000121062 250 ntBASIC4.87□□□□□ -1.63
Vps53Q8CCB4 n-R5s207-201ENSMUST00000122497 118 ntBASIC4.87□□□□□ -1.63
Vps53Q8CCB4 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC4.87□□□□□ -1.63
Vps53Q8CCB4 Gm7855-201ENSMUST00000137737 687 ntBASIC4.87□□□□□ -1.63
Vps53Q8CCB4 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC4.87□□□□□ -1.63
Vps53Q8CCB4 Igkv17-134-201ENSMUST00000168310 348 ntBASIC4.87□□□□□ -1.63
Vps53Q8CCB4 Gm7398-201ENSMUST00000178589 639 ntBASIC4.87□□□□□ -1.63
Vps53Q8CCB4 Gm7375-201ENSMUST00000179232 639 ntBASIC4.87□□□□□ -1.63
Vps53Q8CCB4 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC4.87□□□□□ -1.63
Vps53Q8CCB4 Gm3681-201ENSMUST00000179940 639 ntBASIC4.87□□□□□ -1.63
Vps53Q8CCB4 Gm29105-201ENSMUST00000187256 450 ntBASIC4.87□□□□□ -1.63
Vps53Q8CCB4 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC4.87□□□□□ -1.63
Vps53Q8CCB4 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC4.87□□□□□ -1.63
Vps53Q8CCB4 Gm37164-201ENSMUST00000192809 637 ntBASIC4.87□□□□□ -1.63
Vps53Q8CCB4 Gm43070-201ENSMUST00000196938 415 ntBASIC4.87□□□□□ -1.63
Vps53Q8CCB4 Gm42465-201ENSMUST00000197036 492 ntBASIC4.87□□□□□ -1.63
Vps53Q8CCB4 Gm5660-201ENSMUST00000197453 1149 ntBASIC4.87□□□□□ -1.63
Vps53Q8CCB4 Gm43675-201ENSMUST00000199468 1184 ntBASIC4.87□□□□□ -1.63
Vps53Q8CCB4 Gm43730-201ENSMUST00000199863 372 ntBASIC4.87□□□□□ -1.63
Vps53Q8CCB4 Gm43578-201ENSMUST00000201250 459 ntBASIC4.87□□□□□ -1.63
Vps53Q8CCB4 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC4.87□□□□□ -1.63
Vps53Q8CCB4 Gm8125-201ENSMUST00000216602 738 ntBASIC4.87□□□□□ -1.63
Vps53Q8CCB4 AC153852.1-201ENSMUST00000217881 567 ntBASIC4.87□□□□□ -1.63
Vps53Q8CCB4 AC152062.1-201ENSMUST00000218129 386 ntBASIC4.87□□□□□ -1.63
Vps53Q8CCB4 AC160962.2-201ENSMUST00000224761 632 ntBASIC4.87□□□□□ -1.63
Vps53Q8CCB4 AC150560.2-201ENSMUST00000227208 171 ntBASIC4.87□□□□□ -1.63
Vps53Q8CCB4 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC4.87□□□□□ -1.63
Vps53Q8CCB4 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Vps53Q8CCB4 Gm5548-201ENSMUST00000055878 397 ntBASIC4.87□□□□□ -1.63
Vps53Q8CCB4 Gm5518-201ENSMUST00000084171 648 ntBASIC4.87□□□□□ -1.63
Vps53Q8CCB4 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Vps53Q8CCB4 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
Vps53Q8CCB4 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Vps53Q8CCB4 Ptprz1-201ENSMUST00000090568 8068 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
Vps53Q8CCB4 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Vps53Q8CCB4 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
Vps53Q8CCB4 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Vps53Q8CCB4 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Vps53Q8CCB4 Gm44682-201ENSMUST00000208501 2614 ntBASIC4.86□□□□□ -1.63
Vps53Q8CCB4 Gm37668-201ENSMUST00000193745 1944 ntBASIC4.86□□□□□ -1.63
Vps53Q8CCB4 Gm25097-201ENSMUST00000104042 145 ntBASIC4.86□□□□□ -1.63
Vps53Q8CCB4 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms