Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm15981-201ENSMUST00000119196 457 ntBASIC5.93□□□□□ -1.46
Trim47Q8C0E3 Gm12231-201ENSMUST00000119447 695 ntBASIC5.93□□□□□ -1.46
Trim47Q8C0E3 Smt3h2-ps-201ENSMUST00000121084 285 ntBASIC5.93□□□□□ -1.46
Trim47Q8C0E3 Gm7670-201ENSMUST00000121272 641 ntBASIC5.93□□□□□ -1.46
Trim47Q8C0E3 Gm13973-201ENSMUST00000121371 894 ntBASIC5.93□□□□□ -1.46
Trim47Q8C0E3 Gm23078-201ENSMUST00000157848 148 ntBASIC5.93□□□□□ -1.46
Trim47Q8C0E3 Gm22312-201ENSMUST00000158005 130 ntBASIC5.93□□□□□ -1.46
Trim47Q8C0E3 Gm22389-201ENSMUST00000158193 301 ntBASIC5.93□□□□□ -1.46
Trim47Q8C0E3 Gm22435-201ENSMUST00000158552 128 ntBASIC5.93□□□□□ -1.46
Trim47Q8C0E3 Gas5-209ENSMUST00000159663 346 ntTSL 3 BASIC5.93□□□□□ -1.46
Trim47Q8C0E3 Gm29596-201ENSMUST00000185710 385 ntBASIC5.93□□□□□ -1.46
Trim47Q8C0E3 Gm37882-201ENSMUST00000195254 196 ntBASIC5.93□□□□□ -1.46
Trim47Q8C0E3 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC5.93□□□□□ -1.46
Trim47Q8C0E3 Gm45327-201ENSMUST00000211612 565 ntBASIC5.93□□□□□ -1.46
Trim47Q8C0E3 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC5.93□□□□□ -1.46
Trim47Q8C0E3 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC5.93□□□□□ -1.46
Trim47Q8C0E3 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Trim47Q8C0E3 AC158142.2-201ENSMUST00000227892 635 ntBASIC5.93□□□□□ -1.46
Trim47Q8C0E3 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Trim47Q8C0E3 Gm25187-201ENSMUST00000083906 133 ntBASIC5.93□□□□□ -1.46
Trim47Q8C0E3 Mir496a-201ENSMUST00000093627 79 ntBASIC5.93□□□□□ -1.46
Trim47Q8C0E3 Fat1-203ENSMUST00000189017 14651 ntTSL 5 BASIC5.93□□□□□ -1.46
Trim47Q8C0E3 Zfand6-201ENSMUST00000069537 1658 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Trim47Q8C0E3 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Trim47Q8C0E3 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Trim47Q8C0E3 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Trim47Q8C0E3 Olfr473-202ENSMUST00000217618 2319 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
Trim47Q8C0E3 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Trim47Q8C0E3 Gm2366-201ENSMUST00000180753 3982 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Trim47Q8C0E3 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Trim47Q8C0E3 E330014E10Rik-201ENSMUST00000071182 2476 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Trim47Q8C0E3 AC153729.4-201ENSMUST00000217582 3826 ntBASIC5.92□□□□□ -1.46
Trim47Q8C0E3 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Trim47Q8C0E3 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Trim47Q8C0E3 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Trim47Q8C0E3 Olfr1065-202ENSMUST00000216162 2148 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
Trim47Q8C0E3 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
Trim47Q8C0E3 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Trim47Q8C0E3 Senp8-202ENSMUST00000163586 3570 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
Trim47Q8C0E3 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC5.92□□□□□ -1.46
Trim47Q8C0E3 Gm6884-201ENSMUST00000119318 615 ntBASIC5.92□□□□□ -1.46
Trim47Q8C0E3 Gm12808-201ENSMUST00000120597 404 ntBASIC5.92□□□□□ -1.46
Trim47Q8C0E3 Gm24546-201ENSMUST00000158652 102 ntBASIC5.92□□□□□ -1.46
Trim47Q8C0E3 Gm16353-201ENSMUST00000159458 1223 ntBASIC5.92□□□□□ -1.46
Trim47Q8C0E3 Gm4222-201ENSMUST00000165784 470 ntBASIC5.92□□□□□ -1.46
Trim47Q8C0E3 Gm8114-201ENSMUST00000172225 484 ntBASIC5.92□□□□□ -1.46
Trim47Q8C0E3 Gm25956-201ENSMUST00000175115 217 ntBASIC5.92□□□□□ -1.46
Trim47Q8C0E3 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC5.92□□□□□ -1.46
Trim47Q8C0E3 Gm28747-201ENSMUST00000185366 571 ntTSL 5 BASIC5.92□□□□□ -1.46
Trim47Q8C0E3 Ighv1-40-201ENSMUST00000194231 345 ntBASIC5.92□□□□□ -1.46
Trim47Q8C0E3 Gm37445-201ENSMUST00000195318 242 ntBASIC5.92□□□□□ -1.46
Trim47Q8C0E3 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC5.92□□□□□ -1.46
Trim47Q8C0E3 Gm20144-201ENSMUST00000203031 165 ntBASIC5.92□□□□□ -1.46
Trim47Q8C0E3 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC5.92□□□□□ -1.46
Trim47Q8C0E3 Gm18468-201ENSMUST00000207321 369 ntBASIC5.92□□□□□ -1.46
Trim47Q8C0E3 Gm18470-201ENSMUST00000207467 420 ntBASIC5.92□□□□□ -1.46
Trim47Q8C0E3 Gm18465-201ENSMUST00000207468 369 ntBASIC5.92□□□□□ -1.46
Trim47Q8C0E3 Gm18464-201ENSMUST00000207803 420 ntBASIC5.92□□□□□ -1.46
Trim47Q8C0E3 Gm18458-201ENSMUST00000207908 369 ntBASIC5.92□□□□□ -1.46
Trim47Q8C0E3 Gm18461-201ENSMUST00000208421 420 ntBASIC5.92□□□□□ -1.46
Trim47Q8C0E3 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC5.92□□□□□ -1.46
Trim47Q8C0E3 Gm45859-201ENSMUST00000212794 214 ntBASIC5.92□□□□□ -1.46
Trim47Q8C0E3 AC155922.1-201ENSMUST00000220100 373 ntBASIC5.92□□□□□ -1.46
Trim47Q8C0E3 Gm26497-201ENSMUST00000083146 107 ntBASIC5.92□□□□□ -1.46
Trim47Q8C0E3 Gm23845-201ENSMUST00000083834 152 ntBASIC5.92□□□□□ -1.46
Trim47Q8C0E3 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Trim47Q8C0E3 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
Trim47Q8C0E3 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
Trim47Q8C0E3 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Trim47Q8C0E3 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
Trim47Q8C0E3 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Trim47Q8C0E3 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Trim47Q8C0E3 Smc5-206ENSMUST00000226111 3265 ntBASIC5.92□□□□□ -1.46
Trim47Q8C0E3 Gm43428-201ENSMUST00000200108 3845 ntBASIC5.92□□□□□ -1.46
Trim47Q8C0E3 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
Trim47Q8C0E3 CT025556.1-201ENSMUST00000222965 1884 ntBASIC5.92□□□□□ -1.46
Trim47Q8C0E3 Vps41-201ENSMUST00000072961 3199 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Trim47Q8C0E3 Ankar-203ENSMUST00000212573 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Trim47Q8C0E3 Gm34639-201ENSMUST00000222648 2241 ntTSL 5 BASIC5.91□□□□□ -1.46
Trim47Q8C0E3 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Trim47Q8C0E3 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC5.91□□□□□ -1.46
Trim47Q8C0E3 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC5.91□□□□□ -1.46
Trim47Q8C0E3 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC5.91□□□□□ -1.46
Trim47Q8C0E3 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC5.91□□□□□ -1.46
Trim47Q8C0E3 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC5.91□□□□□ -1.46
Trim47Q8C0E3 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC5.91□□□□□ -1.46
Trim47Q8C0E3 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC5.91□□□□□ -1.46
Trim47Q8C0E3 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC5.91□□□□□ -1.46
Trim47Q8C0E3 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC5.91□□□□□ -1.46
Trim47Q8C0E3 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC5.91□□□□□ -1.46
Trim47Q8C0E3 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
Trim47Q8C0E3 Gm18913-201ENSMUST00000204311 1789 ntBASIC5.91□□□□□ -1.46
Trim47Q8C0E3 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Trim47Q8C0E3 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Trim47Q8C0E3 Mir881-201ENSMUST00000104844 78 ntBASIC5.91□□□□□ -1.46
Trim47Q8C0E3 Gm7219-201ENSMUST00000119619 297 ntBASIC5.91□□□□□ -1.46
Trim47Q8C0E3 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC5.91□□□□□ -1.46
Trim47Q8C0E3 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC5.91□□□□□ -1.46
Trim47Q8C0E3 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
Trim47Q8C0E3 Gm25389-201ENSMUST00000157340 286 ntBASIC5.91□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms