Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Trim35Q8C006 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Trim35Q8C006 Gm2869-201ENSMUST00000124359 2621 ntBASIC6.79□□□□□ -1.32
Trim35Q8C006 Gm26853-201ENSMUST00000180757 4010 ntTSL 5 BASIC6.79□□□□□ -1.32
Trim35Q8C006 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Trim35Q8C006 Vmn2r5-201ENSMUST00000170270 2484 ntAPPRIS P2 TSL 5 BASIC6.78□□□□□ -1.32
Trim35Q8C006 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Trim35Q8C006 Olfr1406-202ENSMUST00000201132 2952 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
Trim35Q8C006 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Trim35Q8C006 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Trim35Q8C006 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Trim35Q8C006 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Trim35Q8C006 Olfr62-203ENSMUST00000217013 2654 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Trim35Q8C006 Vmn1r1-202ENSMUST00000227586 3766 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Trim35Q8C006 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Trim35Q8C006 AC125328.1-201ENSMUST00000226812 2265 ntBASIC6.78□□□□□ -1.32
Trim35Q8C006 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Trim35Q8C006 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Trim35Q8C006 Olfr318-203ENSMUST00000214728 4552 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Trim35Q8C006 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Trim35Q8C006 Gm6614-202ENSMUST00000181628 2364 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Trim35Q8C006 Mir760-201ENSMUST00000103257 119 ntBASIC6.78□□□□□ -1.32
Trim35Q8C006 Gm24519-201ENSMUST00000104507 132 ntBASIC6.78□□□□□ -1.32
Trim35Q8C006 Gm11971-201ENSMUST00000117715 288 ntBASIC6.78□□□□□ -1.32
Trim35Q8C006 Gm11718-201ENSMUST00000119942 537 ntBASIC6.78□□□□□ -1.32
Trim35Q8C006 Eif4e1b-203ENSMUST00000126785 841 ntAPPRIS ALT2 TSL 3 BASIC6.78□□□□□ -1.32
Trim35Q8C006 Gm12526-201ENSMUST00000154462 615 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Trim35Q8C006 Gm2916-201ENSMUST00000178392 384 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Trim35Q8C006 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Trim35Q8C006 Gm10410-201ENSMUST00000180138 384 ntBASIC6.78□□□□□ -1.32
Trim35Q8C006 AC099934.1-201ENSMUST00000200493 79 ntBASIC6.78□□□□□ -1.32
Trim35Q8C006 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC6.78□□□□□ -1.32
Trim35Q8C006 Gm25797-201ENSMUST00000082640 107 ntBASIC6.78□□□□□ -1.32
Trim35Q8C006 Gm22053-201ENSMUST00000083394 200 ntBASIC6.78□□□□□ -1.32
Trim35Q8C006 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Trim35Q8C006 Gm19301-201ENSMUST00000174283 2210 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Trim35Q8C006 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Trim35Q8C006 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Trim35Q8C006 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC6.78□□□□□ -1.32
Trim35Q8C006 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC6.78□□□□□ -1.32
Trim35Q8C006 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Trim35Q8C006 4933400F21Rik-203ENSMUST00000187295 2633 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Trim35Q8C006 Cep70-201ENSMUST00000093795 2606 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Trim35Q8C006 Kcnmb2-205ENSMUST00000192429 2357 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.32
Trim35Q8C006 Gm38096-201ENSMUST00000193692 2389 ntBASIC6.77□□□□□ -1.32
Trim35Q8C006 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Trim35Q8C006 Zfp442-201ENSMUST00000109916 2922 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Trim35Q8C006 Olfr90-206ENSMUST00000217397 2680 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Trim35Q8C006 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Trim35Q8C006 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Trim35Q8C006 Gm29123-201ENSMUST00000185808 3657 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Trim35Q8C006 Zfp459-201ENSMUST00000056470 3334 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Trim35Q8C006 Cacnb4-203ENSMUST00000102761 8039 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Trim35Q8C006 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
Trim35Q8C006 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Trim35Q8C006 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC6.77□□□□□ -1.33
Trim35Q8C006 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC6.77□□□□□ -1.33
Trim35Q8C006 Mir872-201ENSMUST00000104728 81 ntBASIC6.77□□□□□ -1.33
Trim35Q8C006 Dynlt1-ps1-201ENSMUST00000117045 342 ntBASIC6.77□□□□□ -1.33
Trim35Q8C006 Gm23888-201ENSMUST00000122690 253 ntBASIC6.77□□□□□ -1.33
Trim35Q8C006 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Trim35Q8C006 Gm25387-201ENSMUST00000157813 132 ntBASIC6.77□□□□□ -1.33
Trim35Q8C006 Gm24885-201ENSMUST00000158783 270 ntBASIC6.77□□□□□ -1.33
Trim35Q8C006 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC6.77□□□□□ -1.33
Trim35Q8C006 Gm17118-201ENSMUST00000164032 335 ntTSL 5 BASIC6.77□□□□□ -1.33
Trim35Q8C006 Gm24084-201ENSMUST00000175173 137 ntBASIC6.77□□□□□ -1.33
Trim35Q8C006 Gm27753-201ENSMUST00000184742 203 ntBASIC6.77□□□□□ -1.33
Trim35Q8C006 Gm29668-201ENSMUST00000187802 315 ntBASIC6.77□□□□□ -1.33
Trim35Q8C006 Gm28289-201ENSMUST00000189331 315 ntTSL 5 BASIC6.77□□□□□ -1.33
Trim35Q8C006 Gm9357-201ENSMUST00000207138 805 ntBASIC6.77□□□□□ -1.33
Trim35Q8C006 AC147101.2-201ENSMUST00000219756 184 ntBASIC6.77□□□□□ -1.33
Trim35Q8C006 AC166358.9-201ENSMUST00000220653 375 ntBASIC6.77□□□□□ -1.33
Trim35Q8C006 AC155270.1-202ENSMUST00000221503 352 ntBASIC6.77□□□□□ -1.33
Trim35Q8C006 CT025667.1-201ENSMUST00000225872 382 ntBASIC6.77□□□□□ -1.33
Trim35Q8C006 Gm24036-201ENSMUST00000082868 156 ntBASIC6.77□□□□□ -1.33
Trim35Q8C006 Snora21-201ENSMUST00000082967 137 ntBASIC6.77□□□□□ -1.33
Trim35Q8C006 n-R5s41-201ENSMUST00000083025 119 ntBASIC6.77□□□□□ -1.33
Trim35Q8C006 Gm24451-201ENSMUST00000083353 133 ntBASIC6.77□□□□□ -1.33
Trim35Q8C006 Gm23650-201ENSMUST00000083355 70 ntBASIC6.77□□□□□ -1.33
Trim35Q8C006 Esf1-201ENSMUST00000046030 3396 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Trim35Q8C006 Timd2-204ENSMUST00000169584 2926 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Trim35Q8C006 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Trim35Q8C006 Gm44723-201ENSMUST00000207369 4000 ntBASIC6.77□□□□□ -1.33
Trim35Q8C006 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Trim35Q8C006 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Trim35Q8C006 AC131687.1-201ENSMUST00000225931 5446 ntBASIC6.77□□□□□ -1.33
Trim35Q8C006 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Trim35Q8C006 Nsun4-206ENSMUST00000165493 3920 ntTSL 2 BASIC6.77□□□□□ -1.33
Trim35Q8C006 Gabrg1-201ENSMUST00000031119 4771 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Trim35Q8C006 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Trim35Q8C006 Zfp760-201ENSMUST00000073312 4209 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Trim35Q8C006 Il18r1-202ENSMUST00000108044 4158 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Trim35Q8C006 AC121960.2-201ENSMUST00000227349 3446 ntBASIC6.76□□□□□ -1.33
Trim35Q8C006 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Trim35Q8C006 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Trim35Q8C006 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Trim35Q8C006 Olfr1312-204ENSMUST00000215531 2975 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Trim35Q8C006 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC6.76□□□□□ -1.33
Trim35Q8C006 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
Trim35Q8C006 Uevld-201ENSMUST00000094398 4616 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms