Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 AV026068-237ENSMUST00000226075 572 ntBASIC2.34□□□□□ -2.03
Col7a1Q63870 Mir184-201ENSMUST00000083662 69 ntBASIC2.34□□□□□ -2.03
Col7a1Q63870 Olfr995-201ENSMUST00000099924 1113 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Col7a1Q63870 Neat1-201ENSMUST00000173672 20771 ntBASIC2.34□□□□□ -2.03
Col7a1Q63870 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
Col7a1Q63870 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
Col7a1Q63870 Olfr1273-ps-201ENSMUST00000214356 4698 ntAPPRIS P1 TSL 3 BASIC2.34□□□□□ -2.04
Col7a1Q63870 Gm22961-201ENSMUST00000157964 106 ntBASIC2.34□□□□□ -2.04
Col7a1Q63870 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
Col7a1Q63870 1700071M16Rik-201ENSMUST00000164150 537 ntTSL 3 BASIC2.34□□□□□ -2.04
Col7a1Q63870 Snord93-201ENSMUST00000175580 71 ntBASIC2.34□□□□□ -2.04
Col7a1Q63870 Mir7242-201ENSMUST00000183710 79 ntBASIC2.34□□□□□ -2.04
Col7a1Q63870 Gm27153-201ENSMUST00000184492 407 ntTSL 2 BASIC2.34□□□□□ -2.04
Col7a1Q63870 Gm23460-201ENSMUST00000083258 109 ntBASIC2.34□□□□□ -2.04
Col7a1Q63870 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC2.34□□□□□ -2.04
Col7a1Q63870 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
Col7a1Q63870 Gm15697-201ENSMUST00000121946 2902 ntBASIC2.34□□□□□ -2.04
Col7a1Q63870 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
Col7a1Q63870 Gm44846-201ENSMUST00000207127 3243 ntBASIC2.34□□□□□ -2.04
Col7a1Q63870 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
Col7a1Q63870 AC153887.2-201ENSMUST00000219160 3838 ntBASIC2.33□□□□□ -2.04
Col7a1Q63870 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Col7a1Q63870 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Col7a1Q63870 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Col7a1Q63870 Gm15019-201ENSMUST00000120148 434 ntBASIC2.33□□□□□ -2.04
Col7a1Q63870 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Col7a1Q63870 Gm43256-201ENSMUST00000199995 3091 ntBASIC2.33□□□□□ -2.04
Col7a1Q63870 Olfr1191-ps1-202ENSMUST00000217379 5933 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Col7a1Q63870 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Col7a1Q63870 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Col7a1Q63870 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
Col7a1Q63870 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Col7a1Q63870 Gm7974-201ENSMUST00000117154 408 ntBASIC2.33□□□□□ -2.04
Col7a1Q63870 Gm12849-201ENSMUST00000120013 739 ntBASIC2.33□□□□□ -2.04
Col7a1Q63870 n-R5s45-201ENSMUST00000122592 110 ntBASIC2.33□□□□□ -2.04
Col7a1Q63870 Gm27470-201ENSMUST00000184070 210 ntBASIC2.33□□□□□ -2.04
Col7a1Q63870 Gm21006-201ENSMUST00000196930 667 ntBASIC2.33□□□□□ -2.04
Col7a1Q63870 Gm44712-201ENSMUST00000206250 1076 ntBASIC2.33□□□□□ -2.04
Col7a1Q63870 Gm37363-201ENSMUST00000192336 2233 ntBASIC2.33□□□□□ -2.04
Col7a1Q63870 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC2.33□□□□□ -2.04
Col7a1Q63870 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
Col7a1Q63870 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
Col7a1Q63870 Gm15074-201ENSMUST00000117603 936 ntBASIC2.32□□□□□ -2.04
Col7a1Q63870 Gm23325-201ENSMUST00000157422 129 ntBASIC2.32□□□□□ -2.04
Col7a1Q63870 AL928567.1-201ENSMUST00000197891 138 ntBASIC2.32□□□□□ -2.04
Col7a1Q63870 Gm42474-201ENSMUST00000201073 505 ntBASIC2.32□□□□□ -2.04
Col7a1Q63870 Gm37498-201ENSMUST00000193524 4002 ntBASIC2.32□□□□□ -2.04
Col7a1Q63870 AC125223.3-201ENSMUST00000223588 2067 ntBASIC2.32□□□□□ -2.04
Col7a1Q63870 Gm42447-201ENSMUST00000200102 2903 ntBASIC2.32□□□□□ -2.04
Col7a1Q63870 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Col7a1Q63870 Gm44078-201ENSMUST00000204652 2646 ntBASIC2.32□□□□□ -2.04
Col7a1Q63870 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Col7a1Q63870 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Col7a1Q63870 Olfr1281-202ENSMUST00000208176 4905 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
Col7a1Q63870 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC2.32□□□□□ -2.04
Col7a1Q63870 Gm6444-201ENSMUST00000119611 458 ntBASIC2.32□□□□□ -2.04
Col7a1Q63870 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
Col7a1Q63870 Gm24317-201ENSMUST00000178536 107 ntBASIC2.32□□□□□ -2.04
Col7a1Q63870 Gm28660-201ENSMUST00000186496 253 ntBASIC2.32□□□□□ -2.04
Col7a1Q63870 Gm43722-201ENSMUST00000196054 124 ntBASIC2.32□□□□□ -2.04
Col7a1Q63870 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC2.32□□□□□ -2.04
Col7a1Q63870 AC138401.1-201ENSMUST00000221533 116 ntBASIC2.32□□□□□ -2.04
Col7a1Q63870 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Col7a1Q63870 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
Col7a1Q63870 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Col7a1Q63870 Olfr390-201ENSMUST00000092919 936 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Col7a1Q63870 Gm43658-201ENSMUST00000202348 4176 ntBASIC2.32□□□□□ -2.04
Col7a1Q63870 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
Col7a1Q63870 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC2.32□□□□□ -2.04
Col7a1Q63870 Naa16-201ENSMUST00000022597 13223 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Col7a1Q63870 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.32□□□□□ -2.04
Col7a1Q63870 Gm37887-201ENSMUST00000192752 2716 ntBASIC2.31□□□□□ -2.04
Col7a1Q63870 Gm6574-201ENSMUST00000120037 362 ntBASIC2.31□□□□□ -2.04
Col7a1Q63870 Gm24757-201ENSMUST00000176987 371 ntBASIC2.31□□□□□ -2.04
Col7a1Q63870 Gm19253-201ENSMUST00000204279 307 ntBASIC2.31□□□□□ -2.04
Col7a1Q63870 Gm44157-201ENSMUST00000204720 410 ntBASIC2.31□□□□□ -2.04
Col7a1Q63870 Gm45356-201ENSMUST00000209274 823 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Col7a1Q63870 Klra7-203ENSMUST00000088011 921 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
Col7a1Q63870 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Col7a1Q63870 Olfr1262-202ENSMUST00000111508 6068 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
Col7a1Q63870 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Col7a1Q63870 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
Col7a1Q63870 AC125374.3-201ENSMUST00000214983 2810 ntBASIC2.31□□□□□ -2.04
Col7a1Q63870 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.31□□□□□ -2.04
Col7a1Q63870 AC153522.2-201ENSMUST00000218389 3853 ntBASIC2.31□□□□□ -2.04
Col7a1Q63870 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC2.31□□□□□ -2.04
Col7a1Q63870 Gm23472-201ENSMUST00000101806 191 ntBASIC2.31□□□□□ -2.04
Col7a1Q63870 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.31□□□□□ -2.04
Col7a1Q63870 Gm8121-201ENSMUST00000153583 499 ntBASIC2.31□□□□□ -2.04
Col7a1Q63870 Gm18595-201ENSMUST00000175736 1068 ntBASIC2.31□□□□□ -2.04
Col7a1Q63870 Gm24497-201ENSMUST00000177868 191 ntBASIC2.31□□□□□ -2.04
Col7a1Q63870 Gm25939-201ENSMUST00000179876 191 ntBASIC2.31□□□□□ -2.04
Col7a1Q63870 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Col7a1Q63870 Gm24950-201ENSMUST00000082768 191 ntBASIC2.31□□□□□ -2.04
Col7a1Q63870 Gm23444-201ENSMUST00000082922 191 ntBASIC2.31□□□□□ -2.04
Col7a1Q63870 Gm23971-201ENSMUST00000083317 191 ntBASIC2.31□□□□□ -2.04
Col7a1Q63870 Gm23849-201ENSMUST00000083833 191 ntBASIC2.31□□□□□ -2.04
Col7a1Q63870 Gm26316-201ENSMUST00000083886 191 ntBASIC2.31□□□□□ -2.04
Col7a1Q63870 Rnu2-10-201ENSMUST00000084010 191 ntBASIC2.31□□□□□ -2.04
Col7a1Q63870 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms